Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTL4Q6ZR62 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTL4Q6ZR62 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.86■■□□□ 1.09
RTL4Q6ZR62 AL451085.2-201ENST00000605085 799 ntBASIC21.86■■□□□ 1.09
RTL4Q6ZR62 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTL4Q6ZR62 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTL4Q6ZR62 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTL4Q6ZR62 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTL4Q6ZR62 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTL4Q6ZR62 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RTL4Q6ZR62 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
RTL4Q6ZR62 AC103724.3-201ENST00000564481 992 ntBASIC21.85■■□□□ 1.09
RTL4Q6ZR62 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
RTL4Q6ZR62 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.85■■□□□ 1.09
RTL4Q6ZR62 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTL4Q6ZR62 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RTL4Q6ZR62 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTL4Q6ZR62 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RTL4Q6ZR62 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RTL4Q6ZR62 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RTL4Q6ZR62 AL031848.2-201ENST00000607670 837 ntBASIC21.84■■□□□ 1.09
RTL4Q6ZR62 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.84■■□□□ 1.09
RTL4Q6ZR62 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RTL4Q6ZR62 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RTL4Q6ZR62 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
RTL4Q6ZR62 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RTL4Q6ZR62 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.84■■□□□ 1.09
RTL4Q6ZR62 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.83■■□□□ 1.09
RTL4Q6ZR62 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RTL4Q6ZR62 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RTL4Q6ZR62 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RTL4Q6ZR62 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RTL4Q6ZR62 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RTL4Q6ZR62 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.83■■□□□ 1.09
RTL4Q6ZR62 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.83■■□□□ 1.09
RTL4Q6ZR62 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RTL4Q6ZR62 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
RTL4Q6ZR62 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
RTL4Q6ZR62 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
RTL4Q6ZR62 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RTL4Q6ZR62 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.08
RTL4Q6ZR62 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RTL4Q6ZR62 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
RTL4Q6ZR62 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.82■■□□□ 1.08
RTL4Q6ZR62 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RTL4Q6ZR62 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RTL4Q6ZR62 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RTL4Q6ZR62 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RTL4Q6ZR62 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.82■■□□□ 1.08
RTL4Q6ZR62 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RTL4Q6ZR62 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
RTL4Q6ZR62 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.82■■□□□ 1.08
RTL4Q6ZR62 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RTL4Q6ZR62 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTL4Q6ZR62 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RTL4Q6ZR62 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
RTL4Q6ZR62 AL035685.1-201ENST00000636663 812 ntBASIC21.81■■□□□ 1.08
RTL4Q6ZR62 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTL4Q6ZR62 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
RTL4Q6ZR62 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTL4Q6ZR62 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTL4Q6ZR62 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.8■■□□□ 1.08
RTL4Q6ZR62 AL592295.1-201ENST00000400984 884 ntBASIC21.8■■□□□ 1.08
RTL4Q6ZR62 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.8■■□□□ 1.08
RTL4Q6ZR62 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.8■■□□□ 1.08
RTL4Q6ZR62 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.8■■□□□ 1.08
RTL4Q6ZR62 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
RTL4Q6ZR62 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTL4Q6ZR62 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RTL4Q6ZR62 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTL4Q6ZR62 AC096887.2-201ENST00000623443 1957 ntBASIC21.79■■□□□ 1.08
RTL4Q6ZR62 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTL4Q6ZR62 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTL4Q6ZR62 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
RTL4Q6ZR62 AC009299.2-201ENST00000482477 511 ntBASIC21.78■■□□□ 1.08
RTL4Q6ZR62 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.78■■□□□ 1.08
RTL4Q6ZR62 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTL4Q6ZR62 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTL4Q6ZR62 AC142381.3-201ENST00000568208 1670 ntBASIC21.77■■□□□ 1.08
RTL4Q6ZR62 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTL4Q6ZR62 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RTL4Q6ZR62 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTL4Q6ZR62 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RTL4Q6ZR62 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
RTL4Q6ZR62 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTL4Q6ZR62 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RTL4Q6ZR62 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.77■■□□□ 1.07
RTL4Q6ZR62 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTL4Q6ZR62 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.76■■□□□ 1.07
RTL4Q6ZR62 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RTL4Q6ZR62 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.76■■□□□ 1.07
RTL4Q6ZR62 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.76■■□□□ 1.07
RTL4Q6ZR62 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTL4Q6ZR62 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RTL4Q6ZR62 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTL4Q6ZR62 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
RTL4Q6ZR62 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTL4Q6ZR62 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
RTL4Q6ZR62 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.75■■□□□ 1.07
RTL4Q6ZR62 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms