Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RTL6Q6ICC9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.16■□□□□ 0.98
RTL6Q6ICC9 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTL6Q6ICC9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.15■□□□□ 0.98
RTL6Q6ICC9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.15■□□□□ 0.98
RTL6Q6ICC9 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.15■□□□□ 0.98
RTL6Q6ICC9 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.15■□□□□ 0.98
RTL6Q6ICC9 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RTL6Q6ICC9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RTL6Q6ICC9 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
RTL6Q6ICC9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.14■□□□□ 0.97
RTL6Q6ICC9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.14■□□□□ 0.97
RTL6Q6ICC9 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.14■□□□□ 0.97
RTL6Q6ICC9 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTL6Q6ICC9 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTL6Q6ICC9 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RTL6Q6ICC9 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.13■□□□□ 0.97
RTL6Q6ICC9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
RTL6Q6ICC9 KRT16P3-201ENST00000439127 1283 ntBASIC21.13■□□□□ 0.97
RTL6Q6ICC9 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTL6Q6ICC9 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTL6Q6ICC9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.13■□□□□ 0.97
RTL6Q6ICC9 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTL6Q6ICC9 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
RTL6Q6ICC9 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RTL6Q6ICC9 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTL6Q6ICC9 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RTL6Q6ICC9 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.12■□□□□ 0.97
RTL6Q6ICC9 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.12■□□□□ 0.97
RTL6Q6ICC9 TSPY9P-201ENST00000440215 945 ntBASIC21.12■□□□□ 0.97
RTL6Q6ICC9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.12■□□□□ 0.97
RTL6Q6ICC9 TSPY11P-201ENST00000442607 1045 ntBASIC21.12■□□□□ 0.97
RTL6Q6ICC9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.12■□□□□ 0.97
RTL6Q6ICC9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.12■□□□□ 0.97
RTL6Q6ICC9 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RTL6Q6ICC9 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTL6Q6ICC9 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.11■□□□□ 0.97
RTL6Q6ICC9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RTL6Q6ICC9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.11■□□□□ 0.97
RTL6Q6ICC9 AC092028.1-203ENST00000608262 953 ntBASIC21.11■□□□□ 0.97
RTL6Q6ICC9 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
RTL6Q6ICC9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.11■□□□□ 0.97
RTL6Q6ICC9 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.1■□□□□ 0.97
RTL6Q6ICC9 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTL6Q6ICC9 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTL6Q6ICC9 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTL6Q6ICC9 AC135731.1-201ENST00000569415 2548 ntBASIC21.1■□□□□ 0.97
RTL6Q6ICC9 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTL6Q6ICC9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTL6Q6ICC9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTL6Q6ICC9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTL6Q6ICC9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
RTL6Q6ICC9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.1■□□□□ 0.97
RTL6Q6ICC9 AC011551.1-201ENST00000614101 683 ntBASIC21.1■□□□□ 0.97
RTL6Q6ICC9 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RTL6Q6ICC9 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RTL6Q6ICC9 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RTL6Q6ICC9 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTL6Q6ICC9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTL6Q6ICC9 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTL6Q6ICC9 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.09■□□□□ 0.97
RTL6Q6ICC9 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTL6Q6ICC9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RTL6Q6ICC9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTL6Q6ICC9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
RTL6Q6ICC9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTL6Q6ICC9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.09■□□□□ 0.97
RTL6Q6ICC9 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.09■□□□□ 0.97
RTL6Q6ICC9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RTL6Q6ICC9 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTL6Q6ICC9 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RTL6Q6ICC9 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RTL6Q6ICC9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RTL6Q6ICC9 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RTL6Q6ICC9 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTL6Q6ICC9 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTL6Q6ICC9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.07■□□□□ 0.96
RTL6Q6ICC9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
RTL6Q6ICC9 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTL6Q6ICC9 AC008406.3-201ENST00000620001 1374 ntBASIC21.07■□□□□ 0.96
RTL6Q6ICC9 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTL6Q6ICC9 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTL6Q6ICC9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.06■□□□□ 0.96
RTL6Q6ICC9 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTL6Q6ICC9 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTL6Q6ICC9 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTL6Q6ICC9 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RTL6Q6ICC9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.05■□□□□ 0.96
RTL6Q6ICC9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.05■□□□□ 0.96
RTL6Q6ICC9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
RTL6Q6ICC9 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTL6Q6ICC9 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTL6Q6ICC9 DUSP8P4-201ENST00000399538 1761 ntBASIC21.05■□□□□ 0.96
RTL6Q6ICC9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.05■□□□□ 0.96
RTL6Q6ICC9 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RTL6Q6ICC9 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RTL6Q6ICC9 FOXO3B-201ENST00000395675 1928 ntBASIC21.04■□□□□ 0.96
RTL6Q6ICC9 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTL6Q6ICC9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.04■□□□□ 0.96
RTL6Q6ICC9 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms