Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHRFAM7AQ494W8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHRFAM7AQ494W8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHRFAM7AQ494W8 AC138932.3-201ENST00000567634 1902 ntBASIC20.32■□□□□ 0.84
CHRFAM7AQ494W8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.32■□□□□ 0.84
CHRFAM7AQ494W8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHRFAM7AQ494W8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CHRFAM7AQ494W8 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHRFAM7AQ494W8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHRFAM7AQ494W8 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHRFAM7AQ494W8 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CHRFAM7AQ494W8 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHRFAM7AQ494W8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHRFAM7AQ494W8 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHRFAM7AQ494W8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CHRFAM7AQ494W8 MIR935-201ENST00000401179 91 ntBASIC20.31■□□□□ 0.84
CHRFAM7AQ494W8 MIR3960-201ENST00000583311 91 ntBASIC20.31■□□□□ 0.84
CHRFAM7AQ494W8 MIR4508-201ENST00000584178 70 ntBASIC20.31■□□□□ 0.84
CHRFAM7AQ494W8 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHRFAM7AQ494W8 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CHRFAM7AQ494W8 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
CHRFAM7AQ494W8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.3■□□□□ 0.84
CHRFAM7AQ494W8 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CHRFAM7AQ494W8 AL356441.2-201ENST00000443009 864 ntBASIC20.3■□□□□ 0.84
CHRFAM7AQ494W8 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHRFAM7AQ494W8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.3■□□□□ 0.84
CHRFAM7AQ494W8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CHRFAM7AQ494W8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
CHRFAM7AQ494W8 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHRFAM7AQ494W8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHRFAM7AQ494W8 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHRFAM7AQ494W8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CHRFAM7AQ494W8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CHRFAM7AQ494W8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHRFAM7AQ494W8 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHRFAM7AQ494W8 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHRFAM7AQ494W8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHRFAM7AQ494W8 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.29■□□□□ 0.84
CHRFAM7AQ494W8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHRFAM7AQ494W8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHRFAM7AQ494W8 AL139125.2-201ENST00000623134 1869 ntBASIC20.28■□□□□ 0.84
CHRFAM7AQ494W8 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHRFAM7AQ494W8 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHRFAM7AQ494W8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHRFAM7AQ494W8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.28■□□□□ 0.84
CHRFAM7AQ494W8 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.28■□□□□ 0.84
CHRFAM7AQ494W8 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.28■□□□□ 0.84
CHRFAM7AQ494W8 AL031848.2-201ENST00000607670 837 ntBASIC20.28■□□□□ 0.84
CHRFAM7AQ494W8 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.28■□□□□ 0.84
CHRFAM7AQ494W8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHRFAM7AQ494W8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHRFAM7AQ494W8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHRFAM7AQ494W8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
CHRFAM7AQ494W8 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHRFAM7AQ494W8 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CHRFAM7AQ494W8 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHRFAM7AQ494W8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.27■□□□□ 0.84
CHRFAM7AQ494W8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHRFAM7AQ494W8 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.27■□□□□ 0.84
CHRFAM7AQ494W8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.27■□□□□ 0.84
CHRFAM7AQ494W8 PVT1_1.1-201ENST00000615125 194 ntBASIC20.27■□□□□ 0.84
CHRFAM7AQ494W8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHRFAM7AQ494W8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHRFAM7AQ494W8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHRFAM7AQ494W8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.26■□□□□ 0.83
CHRFAM7AQ494W8 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHRFAM7AQ494W8 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.26■□□□□ 0.83
CHRFAM7AQ494W8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.26■□□□□ 0.83
CHRFAM7AQ494W8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHRFAM7AQ494W8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CHRFAM7AQ494W8 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHRFAM7AQ494W8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHRFAM7AQ494W8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CHRFAM7AQ494W8 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.25■□□□□ 0.83
CHRFAM7AQ494W8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.25■□□□□ 0.83
CHRFAM7AQ494W8 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CHRFAM7AQ494W8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHRFAM7AQ494W8 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.25■□□□□ 0.83
CHRFAM7AQ494W8 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHRFAM7AQ494W8 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHRFAM7AQ494W8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHRFAM7AQ494W8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHRFAM7AQ494W8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHRFAM7AQ494W8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHRFAM7AQ494W8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CHRFAM7AQ494W8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHRFAM7AQ494W8 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.24■□□□□ 0.83
CHRFAM7AQ494W8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.24■□□□□ 0.83
CHRFAM7AQ494W8 AC096887.2-201ENST00000623443 1957 ntBASIC20.24■□□□□ 0.83
CHRFAM7AQ494W8 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHRFAM7AQ494W8 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHRFAM7AQ494W8 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.24■□□□□ 0.83
CHRFAM7AQ494W8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHRFAM7AQ494W8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHRFAM7AQ494W8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.24■□□□□ 0.83
CHRFAM7AQ494W8 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHRFAM7AQ494W8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHRFAM7AQ494W8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHRFAM7AQ494W8 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.23■□□□□ 0.83
CHRFAM7AQ494W8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 763.7 ms