Protein–RNA interactions for Protein: P56557

TMEM50B, Transmembrane protein 50B, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50BP56557 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.91■□□□□ 0.78
TMEM50BP56557 SMPD5-203ENST00000639008 1464 ntBASIC19.91■□□□□ 0.78
TMEM50BP56557 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TMEM50BP56557 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TMEM50BP56557 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.9■□□□□ 0.78
TMEM50BP56557 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM50BP56557 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM50BP56557 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM50BP56557 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.9■□□□□ 0.78
TMEM50BP56557 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM50BP56557 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM50BP56557 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM50BP56557 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM50BP56557 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
TMEM50BP56557 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM50BP56557 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
TMEM50BP56557 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TMEM50BP56557 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.89■□□□□ 0.77
TMEM50BP56557 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM50BP56557 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM50BP56557 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM50BP56557 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM50BP56557 ABCB10P4-201ENST00000566803 2184 ntBASIC19.88■□□□□ 0.77
TMEM50BP56557 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM50BP56557 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
TMEM50BP56557 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM50BP56557 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM50BP56557 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TMEM50BP56557 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM50BP56557 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.88■□□□□ 0.77
TMEM50BP56557 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.88■□□□□ 0.77
TMEM50BP56557 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM50BP56557 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TMEM50BP56557 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.87■□□□□ 0.77
TMEM50BP56557 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.87■□□□□ 0.77
TMEM50BP56557 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM50BP56557 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TMEM50BP56557 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM50BP56557 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM50BP56557 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM50BP56557 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM50BP56557 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM50BP56557 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.86■□□□□ 0.77
TMEM50BP56557 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.86■□□□□ 0.77
TMEM50BP56557 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM50BP56557 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TMEM50BP56557 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM50BP56557 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM50BP56557 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TMEM50BP56557 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.85■□□□□ 0.77
TMEM50BP56557 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM50BP56557 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.85■□□□□ 0.77
TMEM50BP56557 AC092296.2-201ENST00000589470 999 ntBASIC19.85■□□□□ 0.77
TMEM50BP56557 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM50BP56557 DUSP8P5-201ENST00000422884 1815 ntBASIC19.85■□□□□ 0.77
TMEM50BP56557 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM50BP56557 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TMEM50BP56557 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM50BP56557 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM50BP56557 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM50BP56557 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TMEM50BP56557 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM50BP56557 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TMEM50BP56557 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TMEM50BP56557 HLA-L-211ENST00000482052 1765 ntBASIC19.84■□□□□ 0.77
TMEM50BP56557 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TMEM50BP56557 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM50BP56557 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TMEM50BP56557 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TMEM50BP56557 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM50BP56557 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM50BP56557 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.83■□□□□ 0.77
TMEM50BP56557 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TMEM50BP56557 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TMEM50BP56557 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TMEM50BP56557 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TMEM50BP56557 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM50BP56557 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.82■□□□□ 0.76
TMEM50BP56557 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM50BP56557 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM50BP56557 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM50BP56557 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM50BP56557 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM50BP56557 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.81■□□□□ 0.76
TMEM50BP56557 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.81■□□□□ 0.76
TMEM50BP56557 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM50BP56557 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM50BP56557 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM50BP56557 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM50BP56557 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM50BP56557 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM50BP56557 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM50BP56557 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM50BP56557 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM50BP56557 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM50BP56557 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM50BP56557 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.81■□□□□ 0.76
TMEM50BP56557 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM50BP56557 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM50BP56557 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms