Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.52■□□□□ 0.4
FOXA3P55318 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXA3P55318 DUX4L28-201ENST00000623687 678 ntBASIC17.52■□□□□ 0.4
FOXA3P55318 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXA3P55318 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
FOXA3P55318 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
FOXA3P55318 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
FOXA3P55318 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
FOXA3P55318 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXA3P55318 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXA3P55318 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FOXA3P55318 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC17.51■□□□□ 0.39
FOXA3P55318 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FOXA3P55318 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXA3P55318 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.5■□□□□ 0.39
FOXA3P55318 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXA3P55318 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC17.5■□□□□ 0.39
FOXA3P55318 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC17.5■□□□□ 0.39
FOXA3P55318 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FOXA3P55318 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FOXA3P55318 CIB2-204ENST00000557846 934 ntTSL 3 BASIC17.5■□□□□ 0.39
FOXA3P55318 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC17.5■□□□□ 0.39
FOXA3P55318 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FOXA3P55318 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXA3P55318 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
FOXA3P55318 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXA3P55318 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXA3P55318 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXA3P55318 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.49■□□□□ 0.39
FOXA3P55318 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXA3P55318 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXA3P55318 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC17.49■□□□□ 0.39
FOXA3P55318 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
FOXA3P55318 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXA3P55318 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXA3P55318 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXA3P55318 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXA3P55318 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
FOXA3P55318 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.48■□□□□ 0.39
FOXA3P55318 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
FOXA3P55318 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
FOXA3P55318 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FOXA3P55318 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FOXA3P55318 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
FOXA3P55318 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FOXA3P55318 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
FOXA3P55318 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.48■□□□□ 0.39
FOXA3P55318 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
FOXA3P55318 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
FOXA3P55318 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FOXA3P55318 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXA3P55318 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
FOXA3P55318 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.47■□□□□ 0.39
FOXA3P55318 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC17.47■□□□□ 0.39
FOXA3P55318 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.47■□□□□ 0.39
FOXA3P55318 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FOXA3P55318 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.47■□□□□ 0.39
FOXA3P55318 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC17.47■□□□□ 0.39
FOXA3P55318 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC17.47■□□□□ 0.39
FOXA3P55318 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.47■□□□□ 0.39
FOXA3P55318 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FOXA3P55318 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXA3P55318 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC17.47■□□□□ 0.39
FOXA3P55318 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FOXA3P55318 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FOXA3P55318 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FOXA3P55318 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC17.46■□□□□ 0.39
FOXA3P55318 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC17.46■□□□□ 0.39
FOXA3P55318 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
FOXA3P55318 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.46■□□□□ 0.39
FOXA3P55318 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FOXA3P55318 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.46■□□□□ 0.38
FOXA3P55318 AL117328.2-201ENST00000624617 1940 ntBASIC17.45■□□□□ 0.38
FOXA3P55318 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
FOXA3P55318 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
FOXA3P55318 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXA3P55318 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.45■□□□□ 0.38
FOXA3P55318 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXA3P55318 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.44■□□□□ 0.38
FOXA3P55318 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
FOXA3P55318 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXA3P55318 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXA3P55318 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXA3P55318 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXA3P55318 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
FOXA3P55318 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
FOXA3P55318 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXA3P55318 AL359504.2-201ENST00000605506 1601 ntBASIC17.43■□□□□ 0.38
FOXA3P55318 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
FOXA3P55318 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC17.43■□□□□ 0.38
FOXA3P55318 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXA3P55318 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
FOXA3P55318 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
FOXA3P55318 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
FOXA3P55318 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXA3P55318 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FOXA3P55318 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC17.43■□□□□ 0.38
FOXA3P55318 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
FOXA3P55318 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.43■□□□□ 0.38
FOXA3P55318 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms