Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXG1P55316 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXG1P55316 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXG1P55316 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
FOXG1P55316 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXG1P55316 AC020928.2-201ENST00000588717 2197 ntBASIC20.68■□□□□ 0.9
FOXG1P55316 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXG1P55316 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXG1P55316 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXG1P55316 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FOXG1P55316 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXG1P55316 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXG1P55316 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXG1P55316 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXG1P55316 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXG1P55316 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXG1P55316 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.66■□□□□ 0.9
FOXG1P55316 THA1P-201ENST00000590384 1145 ntBASIC20.66■□□□□ 0.9
FOXG1P55316 AL035685.1-201ENST00000636663 812 ntBASIC20.66■□□□□ 0.9
FOXG1P55316 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXG1P55316 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXG1P55316 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXG1P55316 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXG1P55316 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
FOXG1P55316 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
FOXG1P55316 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FOXG1P55316 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXG1P55316 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXG1P55316 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FOXG1P55316 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FOXG1P55316 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
FOXG1P55316 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
FOXG1P55316 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
FOXG1P55316 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.64■□□□□ 0.9
FOXG1P55316 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
FOXG1P55316 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.64■□□□□ 0.89
FOXG1P55316 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.64■□□□□ 0.89
FOXG1P55316 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXG1P55316 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
FOXG1P55316 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
FOXG1P55316 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.64■□□□□ 0.89
FOXG1P55316 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXG1P55316 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXG1P55316 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXG1P55316 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
FOXG1P55316 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXG1P55316 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.63■□□□□ 0.89
FOXG1P55316 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.63■□□□□ 0.89
FOXG1P55316 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.63■□□□□ 0.89
FOXG1P55316 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
FOXG1P55316 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
FOXG1P55316 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
FOXG1P55316 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXG1P55316 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.63■□□□□ 0.89
FOXG1P55316 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.63■□□□□ 0.89
FOXG1P55316 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
FOXG1P55316 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
FOXG1P55316 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXG1P55316 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
FOXG1P55316 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.62■□□□□ 0.89
FOXG1P55316 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.62■□□□□ 0.89
FOXG1P55316 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXG1P55316 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.62■□□□□ 0.89
FOXG1P55316 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.61■□□□□ 0.89
FOXG1P55316 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.61■□□□□ 0.89
FOXG1P55316 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.61■□□□□ 0.89
FOXG1P55316 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
FOXG1P55316 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
FOXG1P55316 AC022211.4-201ENST00000625094 2161 ntBASIC20.61■□□□□ 0.89
FOXG1P55316 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXG1P55316 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FOXG1P55316 MIR4281-201ENST00000580852 62 ntBASIC20.61■□□□□ 0.89
FOXG1P55316 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.61■□□□□ 0.89
FOXG1P55316 AC090877.2-201ENST00000558441 1738 ntBASIC20.61■□□□□ 0.89
FOXG1P55316 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXG1P55316 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.6■□□□□ 0.89
FOXG1P55316 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXG1P55316 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
FOXG1P55316 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXG1P55316 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
FOXG1P55316 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
FOXG1P55316 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.6■□□□□ 0.89
FOXG1P55316 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXG1P55316 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.6■□□□□ 0.89
FOXG1P55316 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
FOXG1P55316 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.6■□□□□ 0.89
FOXG1P55316 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.6■□□□□ 0.89
FOXG1P55316 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXG1P55316 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXG1P55316 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXG1P55316 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXG1P55316 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXG1P55316 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
FOXG1P55316 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXG1P55316 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FOXG1P55316 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FOXG1P55316 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.59■□□□□ 0.89
FOXG1P55316 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.59■□□□□ 0.89
FOXG1P55316 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXG1P55316 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms