Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.33■■□□□ 1.81
CPT1AP50416 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
CPT1AP50416 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.33■■□□□ 1.81
CPT1AP50416 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CPT1AP50416 AC090877.2-201ENST00000558441 1738 ntBASIC26.33■■□□□ 1.81
CPT1AP50416 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CPT1AP50416 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CPT1AP50416 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
CPT1AP50416 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CPT1AP50416 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CPT1AP50416 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
CPT1AP50416 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
CPT1AP50416 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
CPT1AP50416 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.31■■□□□ 1.8
CPT1AP50416 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CPT1AP50416 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26.31■■□□□ 1.8
CPT1AP50416 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC26.31■■□□□ 1.8
CPT1AP50416 AL512631.2-201ENST00000604634 923 ntBASIC26.31■■□□□ 1.8
CPT1AP50416 AC110285.6-201ENST00000617652 491 ntBASIC26.31■■□□□ 1.8
CPT1AP50416 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.31■■□□□ 1.8
CPT1AP50416 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.31■■□□□ 1.8
CPT1AP50416 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CPT1AP50416 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CPT1AP50416 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CPT1AP50416 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.3■■□□□ 1.8
CPT1AP50416 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.3■■□□□ 1.8
CPT1AP50416 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.3■■□□□ 1.8
CPT1AP50416 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CPT1AP50416 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
CPT1AP50416 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CPT1AP50416 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
CPT1AP50416 AC096631.2-201ENST00000436136 790 ntBASIC26.29■■□□□ 1.8
CPT1AP50416 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.29■■□□□ 1.8
CPT1AP50416 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
CPT1AP50416 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.29■■□□□ 1.8
CPT1AP50416 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
CPT1AP50416 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
CPT1AP50416 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CPT1AP50416 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.28■■□□□ 1.8
CPT1AP50416 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
CPT1AP50416 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
CPT1AP50416 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CPT1AP50416 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.27■■□□□ 1.8
CPT1AP50416 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CPT1AP50416 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CPT1AP50416 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC26.27■■□□□ 1.8
CPT1AP50416 SNX5-217ENST00000606557 1087 ntBASIC26.27■■□□□ 1.8
CPT1AP50416 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CPT1AP50416 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.27■■□□□ 1.8
CPT1AP50416 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.27■■□□□ 1.8
CPT1AP50416 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CPT1AP50416 AC097639.1-201ENST00000565519 1891 ntBASIC26.26■■□□□ 1.79
CPT1AP50416 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CPT1AP50416 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CPT1AP50416 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CPT1AP50416 MIR6722-201ENST00000617286 78 ntBASIC26.25■■□□□ 1.79
CPT1AP50416 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.25■■□□□ 1.79
CPT1AP50416 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CPT1AP50416 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CPT1AP50416 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CPT1AP50416 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC26.24■■□□□ 1.79
CPT1AP50416 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.24■■□□□ 1.79
CPT1AP50416 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CPT1AP50416 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CPT1AP50416 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
CPT1AP50416 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CPT1AP50416 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.23■■□□□ 1.79
CPT1AP50416 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CPT1AP50416 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CPT1AP50416 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.23■■□□□ 1.79
CPT1AP50416 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CPT1AP50416 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CPT1AP50416 AC096887.2-201ENST00000623443 1957 ntBASIC26.22■■□□□ 1.79
CPT1AP50416 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CPT1AP50416 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC26.22■■□□□ 1.79
CPT1AP50416 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.22■■□□□ 1.79
CPT1AP50416 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CPT1AP50416 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CPT1AP50416 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.22■■□□□ 1.79
CPT1AP50416 AC005837.3-201ENST00000612163 286 ntBASIC26.22■■□□□ 1.79
CPT1AP50416 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.22■■□□□ 1.79
CPT1AP50416 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CPT1AP50416 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
CPT1AP50416 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.21■■□□□ 1.79
CPT1AP50416 AC133561.4-201ENST00000566112 224 ntBASIC26.21■■□□□ 1.79
CPT1AP50416 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.21■■□□□ 1.79
CPT1AP50416 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
CPT1AP50416 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CPT1AP50416 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
CPT1AP50416 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.2■■□□□ 1.78
CPT1AP50416 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.19■■□□□ 1.78
CPT1AP50416 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CPT1AP50416 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CPT1AP50416 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CPT1AP50416 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CPT1AP50416 ERN1-208ENST00000606895 2068 ntBASIC26.19■■□□□ 1.78
CPT1AP50416 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CPT1AP50416 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CPT1AP50416 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CPT1AP50416 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms