Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 KRT18P10-201ENST00000388836 1287 ntBASIC19.25■□□□□ 0.67
THBS3P49746 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
THBS3P49746 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
THBS3P49746 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.25■□□□□ 0.67
THBS3P49746 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
THBS3P49746 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
THBS3P49746 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
THBS3P49746 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
THBS3P49746 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
THBS3P49746 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
THBS3P49746 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
THBS3P49746 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
THBS3P49746 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
THBS3P49746 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
THBS3P49746 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
THBS3P49746 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
THBS3P49746 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.23■□□□□ 0.67
THBS3P49746 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
THBS3P49746 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.23■□□□□ 0.67
THBS3P49746 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
THBS3P49746 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
THBS3P49746 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
THBS3P49746 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
THBS3P49746 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
THBS3P49746 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
THBS3P49746 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.23■□□□□ 0.67
THBS3P49746 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
THBS3P49746 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.23■□□□□ 0.67
THBS3P49746 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
THBS3P49746 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
THBS3P49746 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
THBS3P49746 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
THBS3P49746 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
THBS3P49746 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
THBS3P49746 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
THBS3P49746 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
THBS3P49746 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
THBS3P49746 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
THBS3P49746 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
THBS3P49746 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
THBS3P49746 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.22■□□□□ 0.67
THBS3P49746 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
THBS3P49746 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.22■□□□□ 0.67
THBS3P49746 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.21■□□□□ 0.67
THBS3P49746 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
THBS3P49746 RAP2CP1-202ENST00000605179 643 ntBASIC19.21■□□□□ 0.67
THBS3P49746 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
THBS3P49746 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
THBS3P49746 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
THBS3P49746 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
THBS3P49746 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
THBS3P49746 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
THBS3P49746 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
THBS3P49746 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
THBS3P49746 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
THBS3P49746 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.2■□□□□ 0.66
THBS3P49746 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.2■□□□□ 0.66
THBS3P49746 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
THBS3P49746 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
THBS3P49746 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
THBS3P49746 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
THBS3P49746 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
THBS3P49746 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
THBS3P49746 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
THBS3P49746 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
THBS3P49746 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
THBS3P49746 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
THBS3P49746 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.19■□□□□ 0.66
THBS3P49746 AC026202.3-201ENST00000600805 1127 ntBASIC19.19■□□□□ 0.66
THBS3P49746 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
THBS3P49746 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.19■□□□□ 0.66
THBS3P49746 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
THBS3P49746 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
THBS3P49746 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.18■□□□□ 0.66
THBS3P49746 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.18■□□□□ 0.66
THBS3P49746 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
THBS3P49746 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
THBS3P49746 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
THBS3P49746 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
THBS3P49746 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
THBS3P49746 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
THBS3P49746 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
THBS3P49746 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
THBS3P49746 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
THBS3P49746 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.17■□□□□ 0.66
THBS3P49746 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
THBS3P49746 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
THBS3P49746 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.17■□□□□ 0.66
THBS3P49746 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.17■□□□□ 0.66
THBS3P49746 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
THBS3P49746 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
THBS3P49746 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
THBS3P49746 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
THBS3P49746 MIR6089-201ENST00000616698 64 ntBASIC19.16■□□□□ 0.66
THBS3P49746 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.16■□□□□ 0.66
THBS3P49746 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.16■□□□□ 0.66
THBS3P49746 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
THBS3P49746 LINC01124-201ENST00000409786 2117 ntBASIC19.16■□□□□ 0.66
THBS3P49746 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.16■□□□□ 0.66
THBS3P49746 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms