Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SRP9P49458 AC097639.1-201ENST00000565519 1891 ntBASIC20.65■□□□□ 0.9
SRP9P49458 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRP9P49458 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRP9P49458 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRP9P49458 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SRP9P49458 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.65■□□□□ 0.9
SRP9P49458 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SRP9P49458 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.65■□□□□ 0.9
SRP9P49458 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
SRP9P49458 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SRP9P49458 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
SRP9P49458 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SRP9P49458 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SRP9P49458 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRP9P49458 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.64■□□□□ 0.89
SRP9P49458 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SRP9P49458 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRP9P49458 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
SRP9P49458 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SRP9P49458 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.63■□□□□ 0.89
SRP9P49458 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SRP9P49458 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.63■□□□□ 0.89
SRP9P49458 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SRP9P49458 AC096887.2-201ENST00000623443 1957 ntBASIC20.63■□□□□ 0.89
SRP9P49458 CLDN5-201ENST00000403084 2357 ntBASIC20.63■□□□□ 0.89
SRP9P49458 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SRP9P49458 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SRP9P49458 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
SRP9P49458 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SRP9P49458 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SRP9P49458 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SRP9P49458 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
SRP9P49458 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SRP9P49458 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SRP9P49458 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRP9P49458 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRP9P49458 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.61■□□□□ 0.89
SRP9P49458 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SRP9P49458 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.61■□□□□ 0.89
SRP9P49458 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.61■□□□□ 0.89
SRP9P49458 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SRP9P49458 AC133552.2-201ENST00000619106 1032 ntBASIC20.61■□□□□ 0.89
SRP9P49458 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SRP9P49458 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SRP9P49458 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRP9P49458 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.61■□□□□ 0.89
SRP9P49458 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRP9P49458 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SRP9P49458 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SRP9P49458 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SRP9P49458 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SRP9P49458 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SRP9P49458 AC026202.3-201ENST00000600805 1127 ntBASIC20.6■□□□□ 0.89
SRP9P49458 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SRP9P49458 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SRP9P49458 LINC00543-201ENST00000567234 1845 ntBASIC20.6■□□□□ 0.89
SRP9P49458 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
SRP9P49458 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SRP9P49458 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRP9P49458 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRP9P49458 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRP9P49458 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.58■□□□□ 0.89
SRP9P49458 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.58■□□□□ 0.89
SRP9P49458 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.58■□□□□ 0.89
SRP9P49458 RAP2CP1-202ENST00000605179 643 ntBASIC20.58■□□□□ 0.89
SRP9P49458 AC009831.1-201ENST00000580420 1582 ntBASIC20.58■□□□□ 0.88
SRP9P49458 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SRP9P49458 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRP9P49458 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.57■□□□□ 0.88
SRP9P49458 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRP9P49458 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRP9P49458 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRP9P49458 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRP9P49458 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRP9P49458 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRP9P49458 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.56■□□□□ 0.88
SRP9P49458 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
SRP9P49458 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRP9P49458 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRP9P49458 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRP9P49458 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SRP9P49458 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRP9P49458 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRP9P49458 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRP9P49458 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRP9P49458 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRP9P49458 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRP9P49458 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRP9P49458 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.55■□□□□ 0.88
SRP9P49458 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SRP9P49458 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SRP9P49458 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRP9P49458 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRP9P49458 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
SRP9P49458 NTF6A-201ENST00000591175 560 ntBASIC20.55■□□□□ 0.88
SRP9P49458 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.55■□□□□ 0.88
SRP9P49458 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRP9P49458 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRP9P49458 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms