Protein–RNA interactions for Protein: P48378

RFX2, DNA-binding protein RFX2, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2P48378 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RFX2P48378 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RFX2P48378 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFX2P48378 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFX2P48378 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFX2P48378 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.39■□□□□ 0.85
RFX2P48378 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
RFX2P48378 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RFX2P48378 SLC6A10P-202ENST00000431994 2058 ntBASIC20.38■□□□□ 0.85
RFX2P48378 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.38■□□□□ 0.85
RFX2P48378 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFX2P48378 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RFX2P48378 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.38■□□□□ 0.85
RFX2P48378 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFX2P48378 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RFX2P48378 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RFX2P48378 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RFX2P48378 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFX2P48378 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.36■□□□□ 0.85
RFX2P48378 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFX2P48378 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFX2P48378 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.36■□□□□ 0.85
RFX2P48378 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.36■□□□□ 0.85
RFX2P48378 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RFX2P48378 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.36■□□□□ 0.85
RFX2P48378 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.35■□□□□ 0.85
RFX2P48378 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.35■□□□□ 0.85
RFX2P48378 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFX2P48378 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFX2P48378 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RFX2P48378 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFX2P48378 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFX2P48378 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RFX2P48378 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFX2P48378 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.34■□□□□ 0.85
RFX2P48378 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX2P48378 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.34■□□□□ 0.85
RFX2P48378 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX2P48378 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX2P48378 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX2P48378 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX2P48378 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RFX2P48378 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
RFX2P48378 AC007375.3-201ENST00000600936 2314 ntBASIC20.33■□□□□ 0.85
RFX2P48378 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFX2P48378 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RFX2P48378 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.33■□□□□ 0.85
RFX2P48378 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RFX2P48378 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RFX2P48378 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.33■□□□□ 0.85
RFX2P48378 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RFX2P48378 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
RFX2P48378 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
RFX2P48378 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RFX2P48378 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
RFX2P48378 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RFX2P48378 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFX2P48378 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFX2P48378 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFX2P48378 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFX2P48378 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFX2P48378 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RFX2P48378 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFX2P48378 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFX2P48378 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RFX2P48378 AC137767.1-201ENST00000602918 1920 ntBASIC20.31■□□□□ 0.84
RFX2P48378 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.31■□□□□ 0.84
RFX2P48378 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFX2P48378 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.31■□□□□ 0.84
RFX2P48378 SLC25A24-204ENST00000569674 2357 ntBASIC20.31■□□□□ 0.84
RFX2P48378 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFX2P48378 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.31■□□□□ 0.84
RFX2P48378 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFX2P48378 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.31■□□□□ 0.84
RFX2P48378 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFX2P48378 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.3■□□□□ 0.84
RFX2P48378 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.3■□□□□ 0.84
RFX2P48378 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.3■□□□□ 0.84
RFX2P48378 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFX2P48378 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RFX2P48378 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFX2P48378 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFX2P48378 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFX2P48378 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFX2P48378 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RFX2P48378 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RFX2P48378 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.28■□□□□ 0.84
RFX2P48378 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
RFX2P48378 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.28■□□□□ 0.84
RFX2P48378 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RFX2P48378 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.28■□□□□ 0.84
RFX2P48378 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RFX2P48378 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFX2P48378 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.28■□□□□ 0.84
RFX2P48378 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.28■□□□□ 0.84
RFX2P48378 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.28■□□□□ 0.84
RFX2P48378 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.28■□□□□ 0.84
RFX2P48378 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
RFX2P48378 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.28■□□□□ 0.84
RFX2P48378 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms