Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SOX6P35712 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.93■□□□□ 0.94
SOX6P35712 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.93■□□□□ 0.94
SOX6P35712 AC110285.7-201ENST00000624417 1536 ntBASIC20.93■□□□□ 0.94
SOX6P35712 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SOX6P35712 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SOX6P35712 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.93■□□□□ 0.94
SOX6P35712 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SOX6P35712 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SOX6P35712 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SOX6P35712 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SOX6P35712 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.92■□□□□ 0.94
SOX6P35712 AC087741.3-201ENST00000624270 1347 ntBASIC20.92■□□□□ 0.94
SOX6P35712 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SOX6P35712 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SOX6P35712 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.92■□□□□ 0.94
SOX6P35712 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SOX6P35712 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SOX6P35712 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SOX6P35712 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
SOX6P35712 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SOX6P35712 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SOX6P35712 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SOX6P35712 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
SOX6P35712 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SOX6P35712 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SOX6P35712 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SOX6P35712 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SOX6P35712 SLC6A10P-202ENST00000431994 2058 ntBASIC20.91■□□□□ 0.94
SOX6P35712 RPS2P35-201ENST00000443417 897 ntBASIC20.91■□□□□ 0.94
SOX6P35712 AC108673.1-201ENST00000510422 1159 ntBASIC20.91■□□□□ 0.94
SOX6P35712 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
SOX6P35712 AC004812.2-201ENST00000611079 2094 ntBASIC20.91■□□□□ 0.94
SOX6P35712 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SOX6P35712 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SOX6P35712 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SOX6P35712 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.9■□□□□ 0.94
SOX6P35712 AC044849.2-201ENST00000606596 710 ntBASIC20.9■□□□□ 0.94
SOX6P35712 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SOX6P35712 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SOX6P35712 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
SOX6P35712 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.89■□□□□ 0.94
SOX6P35712 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SOX6P35712 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.89■□□□□ 0.93
SOX6P35712 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.89■□□□□ 0.93
SOX6P35712 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
SOX6P35712 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SOX6P35712 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SOX6P35712 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SOX6P35712 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.89■□□□□ 0.93
SOX6P35712 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SOX6P35712 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SOX6P35712 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SOX6P35712 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SOX6P35712 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.88■□□□□ 0.93
SOX6P35712 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.88■□□□□ 0.93
SOX6P35712 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.88■□□□□ 0.93
SOX6P35712 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SOX6P35712 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SOX6P35712 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SOX6P35712 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SOX6P35712 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.88■□□□□ 0.93
SOX6P35712 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SOX6P35712 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SOX6P35712 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SOX6P35712 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SOX6P35712 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SOX6P35712 ABCB10P4-201ENST00000566803 2184 ntBASIC20.87■□□□□ 0.93
SOX6P35712 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SOX6P35712 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SOX6P35712 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SOX6P35712 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SOX6P35712 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SOX6P35712 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.86■□□□□ 0.93
SOX6P35712 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SOX6P35712 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SOX6P35712 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SOX6P35712 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.86■□□□□ 0.93
SOX6P35712 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SOX6P35712 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SOX6P35712 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SOX6P35712 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.85■□□□□ 0.93
SOX6P35712 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SOX6P35712 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SOX6P35712 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SOX6P35712 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SOX6P35712 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SOX6P35712 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SOX6P35712 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SOX6P35712 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.84■□□□□ 0.93
SOX6P35712 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SOX6P35712 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.83■□□□□ 0.93
SOX6P35712 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.83■□□□□ 0.93
SOX6P35712 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SOX6P35712 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.92
SOX6P35712 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.82■□□□□ 0.92
SOX6P35712 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SOX6P35712 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SOX6P35712 LINC00565-201ENST00000562710 2331 ntBASIC20.82■□□□□ 0.92
SOX6P35712 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms