Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CKS2P33552 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CKS2P33552 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CKS2P33552 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CKS2P33552 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CKS2P33552 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC17.19■□□□□ 0.34
CKS2P33552 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CKS2P33552 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CKS2P33552 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CKS2P33552 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CKS2P33552 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CKS2P33552 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CKS2P33552 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CKS2P33552 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CKS2P33552 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CKS2P33552 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CKS2P33552 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CKS2P33552 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CKS2P33552 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.18■□□□□ 0.34
CKS2P33552 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC17.18■□□□□ 0.34
CKS2P33552 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CKS2P33552 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CKS2P33552 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CKS2P33552 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CKS2P33552 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CKS2P33552 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CKS2P33552 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CKS2P33552 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CKS2P33552 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CKS2P33552 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CKS2P33552 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC17.17■□□□□ 0.34
CKS2P33552 SUZ12P1-203ENST00000578195 985 ntBASIC17.17■□□□□ 0.34
CKS2P33552 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC17.17■□□□□ 0.34
CKS2P33552 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.17■□□□□ 0.34
CKS2P33552 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CKS2P33552 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CKS2P33552 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.16■□□□□ 0.34
CKS2P33552 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CKS2P33552 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CKS2P33552 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CKS2P33552 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CKS2P33552 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC17.16■□□□□ 0.34
CKS2P33552 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CKS2P33552 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CKS2P33552 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
CKS2P33552 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CKS2P33552 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CKS2P33552 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CKS2P33552 AC004812.2-201ENST00000611079 2094 ntBASIC17.16■□□□□ 0.34
CKS2P33552 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CKS2P33552 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CKS2P33552 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CKS2P33552 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CKS2P33552 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CKS2P33552 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CKS2P33552 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CKS2P33552 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.15■□□□□ 0.34
CKS2P33552 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CKS2P33552 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CKS2P33552 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CKS2P33552 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CKS2P33552 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CKS2P33552 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CKS2P33552 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CKS2P33552 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CKS2P33552 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CKS2P33552 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC17.14■□□□□ 0.33
CKS2P33552 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CKS2P33552 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CKS2P33552 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CKS2P33552 C9orf163-202ENST00000624034 2573 ntBASIC17.13■□□□□ 0.33
CKS2P33552 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CKS2P33552 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CKS2P33552 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC17.13■□□□□ 0.33
CKS2P33552 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.13■□□□□ 0.33
CKS2P33552 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.13■□□□□ 0.33
CKS2P33552 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CKS2P33552 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CKS2P33552 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CKS2P33552 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CKS2P33552 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CKS2P33552 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.12■□□□□ 0.33
CKS2P33552 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CKS2P33552 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CKS2P33552 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CKS2P33552 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CKS2P33552 ABCB10P4-201ENST00000566803 2184 ntBASIC17.12■□□□□ 0.33
CKS2P33552 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.12■□□□□ 0.33
CKS2P33552 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CKS2P33552 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CKS2P33552 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CKS2P33552 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CKS2P33552 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CKS2P33552 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CKS2P33552 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CKS2P33552 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CKS2P33552 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CKS2P33552 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CKS2P33552 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CKS2P33552 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms