Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LMO1P25800 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.74■□□□□ 0.75
LMO1P25800 AC018755.3-202ENST00000596210 929 ntBASIC19.74■□□□□ 0.75
LMO1P25800 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LMO1P25800 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LMO1P25800 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LMO1P25800 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LMO1P25800 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LMO1P25800 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LMO1P25800 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
LMO1P25800 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
LMO1P25800 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LMO1P25800 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LMO1P25800 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.73■□□□□ 0.75
LMO1P25800 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
LMO1P25800 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.73■□□□□ 0.75
LMO1P25800 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.72■□□□□ 0.75
LMO1P25800 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.72■□□□□ 0.75
LMO1P25800 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
LMO1P25800 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.72■□□□□ 0.75
LMO1P25800 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LMO1P25800 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LMO1P25800 SPCS2P3-201ENST00000500401 656 ntBASIC19.72■□□□□ 0.75
LMO1P25800 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LMO1P25800 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.72■□□□□ 0.75
LMO1P25800 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
LMO1P25800 FOXO3B-201ENST00000395675 1928 ntBASIC19.72■□□□□ 0.75
LMO1P25800 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LMO1P25800 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.72■□□□□ 0.75
LMO1P25800 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LMO1P25800 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LMO1P25800 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.71■□□□□ 0.75
LMO1P25800 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
LMO1P25800 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LMO1P25800 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
LMO1P25800 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.71■□□□□ 0.75
LMO1P25800 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LMO1P25800 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.71■□□□□ 0.75
LMO1P25800 RPS2P7-201ENST00000447334 885 ntBASIC19.71■□□□□ 0.75
LMO1P25800 U85056.1-201ENST00000616429 682 ntBASIC19.71■□□□□ 0.75
LMO1P25800 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.71■□□□□ 0.75
LMO1P25800 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
LMO1P25800 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LMO1P25800 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LMO1P25800 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMO1P25800 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LMO1P25800 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMO1P25800 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.7■□□□□ 0.74
LMO1P25800 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.7■□□□□ 0.74
LMO1P25800 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMO1P25800 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.69■□□□□ 0.74
LMO1P25800 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.69■□□□□ 0.74
LMO1P25800 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
LMO1P25800 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LMO1P25800 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.69■□□□□ 0.74
LMO1P25800 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LMO1P25800 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMO1P25800 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMO1P25800 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LMO1P25800 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
LMO1P25800 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMO1P25800 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.69■□□□□ 0.74
LMO1P25800 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.69■□□□□ 0.74
LMO1P25800 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.69■□□□□ 0.74
LMO1P25800 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LMO1P25800 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.68■□□□□ 0.74
LMO1P25800 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
LMO1P25800 AC087393.1-201ENST00000582896 145 ntBASIC19.68■□□□□ 0.74
LMO1P25800 MIR6765-201ENST00000614092 87 ntBASIC19.68■□□□□ 0.74
LMO1P25800 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.68■□□□□ 0.74
LMO1P25800 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LMO1P25800 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LMO1P25800 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LMO1P25800 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LMO1P25800 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LMO1P25800 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LMO1P25800 DUX4L9-201ENST00000449051 1259 ntBASIC19.67■□□□□ 0.74
LMO1P25800 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LMO1P25800 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LMO1P25800 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LMO1P25800 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
LMO1P25800 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LMO1P25800 LINC00543-201ENST00000567234 1845 ntBASIC19.66■□□□□ 0.74
LMO1P25800 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LMO1P25800 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LMO1P25800 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LMO1P25800 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LMO1P25800 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMO1P25800 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
LMO1P25800 AC129492.7-201ENST00000622992 756 ntBASIC19.65■□□□□ 0.74
LMO1P25800 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
LMO1P25800 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LMO1P25800 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
LMO1P25800 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMO1P25800 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LMO1P25800 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
LMO1P25800 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.64■□□□□ 0.74
LMO1P25800 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LMO1P25800 KRT18P60-201ENST00000312876 1297 ntBASIC19.64■□□□□ 0.73
LMO1P25800 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms