Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHMP24386 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CHMP24386 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.84■■□□□ 1.09
CHMP24386 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.83■■□□□ 1.09
CHMP24386 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHMP24386 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHMP24386 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHMP24386 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.83■■□□□ 1.09
CHMP24386 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.83■■□□□ 1.09
CHMP24386 DUX4L18-201ENST00000553347 1267 ntBASIC21.83■■□□□ 1.09
CHMP24386 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CHMP24386 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CHMP24386 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.83■■□□□ 1.08
CHMP24386 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CHMP24386 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.83■■□□□ 1.08
CHMP24386 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
CHMP24386 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHMP24386 LINC01124-201ENST00000409786 2117 ntBASIC21.82■■□□□ 1.08
CHMP24386 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHMP24386 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHMP24386 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHMP24386 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHMP24386 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP24386 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.81■■□□□ 1.08
CHMP24386 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP24386 KRT18P10-201ENST00000388836 1287 ntBASIC21.81■■□□□ 1.08
CHMP24386 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.81■■□□□ 1.08
CHMP24386 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.81■■□□□ 1.08
CHMP24386 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP24386 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP24386 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP24386 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP24386 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
CHMP24386 AP003733.4-201ENST00000623785 1697 ntBASIC21.8■■□□□ 1.08
CHMP24386 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP24386 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.8■■□□□ 1.08
CHMP24386 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.8■■□□□ 1.08
CHMP24386 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP24386 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.8■■□□□ 1.08
CHMP24386 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.8■■□□□ 1.08
CHMP24386 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP24386 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
CHMP24386 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.79■■□□□ 1.08
CHMP24386 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.79■■□□□ 1.08
CHMP24386 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP24386 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP24386 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP24386 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
CHMP24386 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CHMP24386 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHMP24386 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHMP24386 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHMP24386 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHMP24386 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.78■■□□□ 1.08
CHMP24386 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.78■■□□□ 1.08
CHMP24386 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.78■■□□□ 1.08
CHMP24386 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.78■■□□□ 1.08
CHMP24386 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
CHMP24386 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHMP24386 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHMP24386 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHMP24386 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
CHMP24386 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHMP24386 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHMP24386 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHMP24386 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHMP24386 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHMP24386 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHMP24386 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHMP24386 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHMP24386 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHMP24386 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHMP24386 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CHMP24386 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CHMP24386 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.76■■□□□ 1.07
CHMP24386 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP24386 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP24386 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP24386 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP24386 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.76■■□□□ 1.07
CHMP24386 AC074183.2-201ENST00000623112 922 ntBASIC21.76■■□□□ 1.07
CHMP24386 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.75■■□□□ 1.07
CHMP24386 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP24386 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP24386 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.75■■□□□ 1.07
CHMP24386 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP24386 SLC6A10P-202ENST00000431994 2058 ntBASIC21.75■■□□□ 1.07
CHMP24386 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP24386 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP24386 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP24386 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP24386 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CHMP24386 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CHMP24386 AC097639.1-201ENST00000565519 1891 ntBASIC21.74■■□□□ 1.07
CHMP24386 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP24386 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP24386 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CHMP24386 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHMP24386 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHMP24386 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms