Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF728P0DKX0 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF728P0DKX0 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ZNF728P0DKX0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
ZNF728P0DKX0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF728P0DKX0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF728P0DKX0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF728P0DKX0 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF728P0DKX0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.84■□□□□ 0.77
ZNF728P0DKX0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF728P0DKX0 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF728P0DKX0 U85056.1-201ENST00000616429 682 ntBASIC19.84■□□□□ 0.77
ZNF728P0DKX0 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF728P0DKX0 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF728P0DKX0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ZNF728P0DKX0 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF728P0DKX0 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.83■□□□□ 0.77
ZNF728P0DKX0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF728P0DKX0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF728P0DKX0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
ZNF728P0DKX0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF728P0DKX0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF728P0DKX0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF728P0DKX0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
ZNF728P0DKX0 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF728P0DKX0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.82■□□□□ 0.76
ZNF728P0DKX0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF728P0DKX0 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.82■□□□□ 0.76
ZNF728P0DKX0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF728P0DKX0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF728P0DKX0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
ZNF728P0DKX0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF728P0DKX0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF728P0DKX0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF728P0DKX0 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF728P0DKX0 AL592293.1-201ENST00000502889 1188 ntBASIC19.81■□□□□ 0.76
ZNF728P0DKX0 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF728P0DKX0 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.81■□□□□ 0.76
ZNF728P0DKX0 AC097639.1-201ENST00000565519 1891 ntBASIC19.81■□□□□ 0.76
ZNF728P0DKX0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
ZNF728P0DKX0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF728P0DKX0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ZNF728P0DKX0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF728P0DKX0 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF728P0DKX0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ZNF728P0DKX0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF728P0DKX0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF728P0DKX0 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF728P0DKX0 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF728P0DKX0 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ZNF728P0DKX0 NTF6A-201ENST00000591175 560 ntBASIC19.8■□□□□ 0.76
ZNF728P0DKX0 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
ZNF728P0DKX0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.8■□□□□ 0.76
ZNF728P0DKX0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF728P0DKX0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF728P0DKX0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
ZNF728P0DKX0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF728P0DKX0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
ZNF728P0DKX0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF728P0DKX0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ZNF728P0DKX0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF728P0DKX0 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.79■□□□□ 0.76
ZNF728P0DKX0 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.79■□□□□ 0.76
ZNF728P0DKX0 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.79■□□□□ 0.76
ZNF728P0DKX0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF728P0DKX0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ZNF728P0DKX0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF728P0DKX0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF728P0DKX0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
ZNF728P0DKX0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.78■□□□□ 0.76
ZNF728P0DKX0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF728P0DKX0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF728P0DKX0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.78■□□□□ 0.76
ZNF728P0DKX0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF728P0DKX0 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF728P0DKX0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.77■□□□□ 0.76
ZNF728P0DKX0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF728P0DKX0 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.77■□□□□ 0.76
ZNF728P0DKX0 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF728P0DKX0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF728P0DKX0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
ZNF728P0DKX0 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
ZNF728P0DKX0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF728P0DKX0 SLC6A10P-202ENST00000431994 2058 ntBASIC19.77■□□□□ 0.75
ZNF728P0DKX0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF728P0DKX0 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF728P0DKX0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF728P0DKX0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF728P0DKX0 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ZNF728P0DKX0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF728P0DKX0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.75■□□□□ 0.75
ZNF728P0DKX0 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF728P0DKX0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF728P0DKX0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF728P0DKX0 LINC00543-201ENST00000567234 1845 ntBASIC19.75■□□□□ 0.75
ZNF728P0DKX0 KRT18P10-201ENST00000388836 1287 ntBASIC19.75■□□□□ 0.75
ZNF728P0DKX0 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF728P0DKX0 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF728P0DKX0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF728P0DKX0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms