Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
RB1P06400 FOXO3B-201ENST00000395675 1928 ntBASIC25.16■■□□□ 1.62
RB1P06400 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
RB1P06400 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.16■■□□□ 1.62
RB1P06400 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RB1P06400 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
RB1P06400 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RB1P06400 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
RB1P06400 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.16■■□□□ 1.62
RB1P06400 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RB1P06400 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
RB1P06400 AC135279.3-201ENST00000610945 1311 ntBASIC25.15■■□□□ 1.62
RB1P06400 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RB1P06400 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
RB1P06400 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RB1P06400 EDA-201ENST00000338901 1233 ntBASIC25.15■■□□□ 1.62
RB1P06400 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RB1P06400 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RB1P06400 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RB1P06400 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
RB1P06400 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.14■■□□□ 1.62
RB1P06400 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
RB1P06400 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.14■■□□□ 1.61
RB1P06400 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RB1P06400 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RB1P06400 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
RB1P06400 AL355001.2-201ENST00000620617 1191 ntBASIC25.13■■□□□ 1.61
RB1P06400 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RB1P06400 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RB1P06400 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
RB1P06400 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
RB1P06400 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC25.12■■□□□ 1.61
RB1P06400 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
RB1P06400 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RB1P06400 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
RB1P06400 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
RB1P06400 SRD5A1P1-201ENST00000442297 786 ntBASIC25.11■■□□□ 1.61
RB1P06400 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.11■■□□□ 1.61
RB1P06400 LGR4-203ENST00000480977 492 ntTSL 2 BASIC25.11■■□□□ 1.61
RB1P06400 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC25.11■■□□□ 1.61
RB1P06400 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC25.11■■□□□ 1.61
RB1P06400 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RB1P06400 AC090877.2-201ENST00000558441 1738 ntBASIC25.1■■□□□ 1.61
RB1P06400 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RB1P06400 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.1■■□□□ 1.61
RB1P06400 MIR5787-201ENST00000611784 55 ntBASIC25.1■■□□□ 1.61
RB1P06400 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.1■■□□□ 1.61
RB1P06400 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
RB1P06400 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RB1P06400 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC25.09■■□□□ 1.61
RB1P06400 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC25.09■■□□□ 1.61
RB1P06400 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC25.09■■□□□ 1.61
RB1P06400 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.09■■□□□ 1.61
RB1P06400 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
RB1P06400 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RB1P06400 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RB1P06400 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.08■■□□□ 1.61
RB1P06400 AC024257.2-201ENST00000549699 147 ntBASIC25.08■■□□□ 1.61
RB1P06400 AC104564.3-201ENST00000582367 638 ntBASIC25.08■■□□□ 1.61
RB1P06400 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.08■■□□□ 1.61
RB1P06400 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.08■■□□□ 1.61
RB1P06400 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
RB1P06400 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.08■■□□□ 1.6
RB1P06400 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RB1P06400 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.07■■□□□ 1.6
RB1P06400 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
RB1P06400 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.07■■□□□ 1.6
RB1P06400 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.07■■□□□ 1.6
RB1P06400 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.07■■□□□ 1.6
RB1P06400 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RB1P06400 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RB1P06400 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.06■■□□□ 1.6
RB1P06400 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RB1P06400 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.06■■□□□ 1.6
RB1P06400 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RB1P06400 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RB1P06400 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
RB1P06400 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RB1P06400 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RB1P06400 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
RB1P06400 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RB1P06400 AC139426.1-201ENST00000568218 2529 ntBASIC25.05■■□□□ 1.6
RB1P06400 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.04■■□□□ 1.6
RB1P06400 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RB1P06400 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RB1P06400 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RB1P06400 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.03■■□□□ 1.6
RB1P06400 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.03■■□□□ 1.6
RB1P06400 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC25.03■■□□□ 1.6
RB1P06400 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RB1P06400 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RB1P06400 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RB1P06400 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.03■■□□□ 1.6
RB1P06400 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC25.03■■□□□ 1.6
RB1P06400 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RB1P06400 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
RB1P06400 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.02■■□□□ 1.6
RB1P06400 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
RB1P06400 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RB1P06400 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms