Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGN1P05114 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
HMGN1P05114 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGN1P05114 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGN1P05114 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.19■□□□□ 0.98
HMGN1P05114 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.19■□□□□ 0.98
HMGN1P05114 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HMGN1P05114 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HMGN1P05114 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HMGN1P05114 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
HMGN1P05114 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HMGN1P05114 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HMGN1P05114 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.18■□□□□ 0.98
HMGN1P05114 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HMGN1P05114 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HMGN1P05114 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGN1P05114 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
HMGN1P05114 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HMGN1P05114 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGN1P05114 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMGN1P05114 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HMGN1P05114 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.16■□□□□ 0.98
HMGN1P05114 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMGN1P05114 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.16■□□□□ 0.98
HMGN1P05114 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
HMGN1P05114 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.16■□□□□ 0.98
HMGN1P05114 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.16■□□□□ 0.98
HMGN1P05114 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMGN1P05114 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HMGN1P05114 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
HMGN1P05114 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.15■□□□□ 0.98
HMGN1P05114 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HMGN1P05114 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMGN1P05114 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
HMGN1P05114 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMGN1P05114 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.15■□□□□ 0.98
HMGN1P05114 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
HMGN1P05114 AC004812.2-201ENST00000611079 2094 ntBASIC21.14■□□□□ 0.98
HMGN1P05114 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.14■□□□□ 0.98
HMGN1P05114 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HMGN1P05114 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.14■□□□□ 0.97
HMGN1P05114 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HMGN1P05114 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.14■□□□□ 0.97
HMGN1P05114 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HMGN1P05114 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HMGN1P05114 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HMGN1P05114 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMGN1P05114 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.13■□□□□ 0.97
HMGN1P05114 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.13■□□□□ 0.97
HMGN1P05114 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMGN1P05114 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.13■□□□□ 0.97
HMGN1P05114 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMGN1P05114 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMGN1P05114 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.12■□□□□ 0.97
HMGN1P05114 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HMGN1P05114 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HMGN1P05114 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGN1P05114 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HMGN1P05114 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HMGN1P05114 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HMGN1P05114 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGN1P05114 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGN1P05114 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGN1P05114 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HMGN1P05114 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGN1P05114 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.12■□□□□ 0.97
HMGN1P05114 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGN1P05114 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGN1P05114 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
HMGN1P05114 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGN1P05114 RP9P-202ENST00000450133 1212 ntBASIC21.11■□□□□ 0.97
HMGN1P05114 AC092296.2-201ENST00000589470 999 ntBASIC21.11■□□□□ 0.97
HMGN1P05114 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HMGN1P05114 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.1■□□□□ 0.97
HMGN1P05114 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
HMGN1P05114 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.1■□□□□ 0.97
HMGN1P05114 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HMGN1P05114 KRT18P10-201ENST00000388836 1287 ntBASIC21.1■□□□□ 0.97
HMGN1P05114 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.1■□□□□ 0.97
HMGN1P05114 DUSP8P5-201ENST00000422884 1815 ntBASIC21.1■□□□□ 0.97
HMGN1P05114 AC133561.1-201ENST00000568600 2415 ntBASIC21.09■□□□□ 0.97
HMGN1P05114 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.09■□□□□ 0.97
HMGN1P05114 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGN1P05114 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGN1P05114 ECEL1P2-201ENST00000461596 1295 ntBASIC21.09■□□□□ 0.97
HMGN1P05114 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGN1P05114 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HMGN1P05114 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HMGN1P05114 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
HMGN1P05114 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.08■□□□□ 0.97
HMGN1P05114 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
HMGN1P05114 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.08■□□□□ 0.97
HMGN1P05114 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HMGN1P05114 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
HMGN1P05114 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
HMGN1P05114 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HMGN1P05114 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.07■□□□□ 0.96
HMGN1P05114 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.07■□□□□ 0.96
HMGN1P05114 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HMGN1P05114 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms