Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DQB1P01920 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.32■□□□□ 0.84
HLA-DQB1P01920 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
HLA-DQB1P01920 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DQB1P01920 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.31■□□□□ 0.84
HLA-DQB1P01920 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DQB1P01920 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.31■□□□□ 0.84
HLA-DQB1P01920 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQB1P01920 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.3■□□□□ 0.84
HLA-DQB1P01920 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQB1P01920 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQB1P01920 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQB1P01920 DUX4L29-201ENST00000425409 679 ntBASIC20.3■□□□□ 0.84
HLA-DQB1P01920 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.3■□□□□ 0.84
HLA-DQB1P01920 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQB1P01920 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQB1P01920 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQB1P01920 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.3■□□□□ 0.84
HLA-DQB1P01920 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQB1P01920 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQB1P01920 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQB1P01920 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQB1P01920 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.29■□□□□ 0.84
HLA-DQB1P01920 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.29■□□□□ 0.84
HLA-DQB1P01920 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.29■□□□□ 0.84
HLA-DQB1P01920 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQB1P01920 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQB1P01920 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DQB1P01920 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DQB1P01920 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
HLA-DQB1P01920 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DQB1P01920 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DQB1P01920 AL359504.2-201ENST00000605506 1601 ntBASIC20.28■□□□□ 0.84
HLA-DQB1P01920 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DQB1P01920 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DQB1P01920 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
HLA-DQB1P01920 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DQB1P01920 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DQB1P01920 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DQB1P01920 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQB1P01920 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQB1P01920 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.27■□□□□ 0.84
HLA-DQB1P01920 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
HLA-DQB1P01920 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQB1P01920 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQB1P01920 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
HLA-DQB1P01920 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQB1P01920 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQB1P01920 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
HLA-DQB1P01920 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.27■□□□□ 0.84
HLA-DQB1P01920 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.27■□□□□ 0.84
HLA-DQB1P01920 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
HLA-DQB1P01920 AC137767.1-201ENST00000602918 1920 ntBASIC20.27■□□□□ 0.84
HLA-DQB1P01920 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DQB1P01920 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
HLA-DQB1P01920 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
HLA-DQB1P01920 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DQB1P01920 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DQB1P01920 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
HLA-DQB1P01920 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DQB1P01920 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DQB1P01920 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DQB1P01920 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DQB1P01920 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DQB1P01920 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
HLA-DQB1P01920 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DQB1P01920 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DQB1P01920 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DQB1P01920 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DQB1P01920 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DQB1P01920 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DQB1P01920 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DQB1P01920 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DQB1P01920 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DQB1P01920 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DQB1P01920 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.24■□□□□ 0.83
HLA-DQB1P01920 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DQB1P01920 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.23■□□□□ 0.83
HLA-DQB1P01920 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.23■□□□□ 0.83
HLA-DQB1P01920 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.23■□□□□ 0.83
HLA-DQB1P01920 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.23■□□□□ 0.83
HLA-DQB1P01920 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DQB1P01920 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.22■□□□□ 0.83
HLA-DQB1P01920 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DQB1P01920 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DQB1P01920 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.22■□□□□ 0.83
HLA-DQB1P01920 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DQB1P01920 AC127496.7-201ENST00000625110 1798 ntBASIC20.22■□□□□ 0.83
HLA-DQB1P01920 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.22■□□□□ 0.83
HLA-DQB1P01920 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DQB1P01920 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HLA-DQB1P01920 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DQB1P01920 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
HLA-DQB1P01920 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
HLA-DQB1P01920 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DQB1P01920 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DQB1P01920 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DQB1P01920 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
HLA-DQB1P01920 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DQB1P01920 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms