Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TRBC1P01850 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.61■■□□□ 1.37
TRBC1P01850 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
TRBC1P01850 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
TRBC1P01850 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.61■■□□□ 1.37
TRBC1P01850 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.6■■□□□ 1.37
TRBC1P01850 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
TRBC1P01850 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.6■■□□□ 1.37
TRBC1P01850 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.6■■□□□ 1.37
TRBC1P01850 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.6■■□□□ 1.37
TRBC1P01850 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.6■■□□□ 1.37
TRBC1P01850 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.6■■□□□ 1.37
TRBC1P01850 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRBC1P01850 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRBC1P01850 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TRBC1P01850 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TRBC1P01850 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRBC1P01850 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.59■■□□□ 1.37
TRBC1P01850 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRBC1P01850 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
TRBC1P01850 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRBC1P01850 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
TRBC1P01850 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.59■■□□□ 1.37
TRBC1P01850 KRT18P24-201ENST00000344739 1156 ntBASIC23.58■■□□□ 1.37
TRBC1P01850 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.58■■□□□ 1.37
TRBC1P01850 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TRBC1P01850 AC022211.4-201ENST00000625094 2161 ntBASIC23.58■■□□□ 1.36
TRBC1P01850 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TRBC1P01850 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRBC1P01850 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TRBC1P01850 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.57■■□□□ 1.36
TRBC1P01850 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TRBC1P01850 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TRBC1P01850 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRBC1P01850 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
TRBC1P01850 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.57■■□□□ 1.36
TRBC1P01850 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TRBC1P01850 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRBC1P01850 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRBC1P01850 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRBC1P01850 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TRBC1P01850 AC120024.1-201ENST00000562672 995 ntBASIC23.56■■□□□ 1.36
TRBC1P01850 AC011551.1-201ENST00000614101 683 ntBASIC23.56■■□□□ 1.36
TRBC1P01850 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRBC1P01850 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.56■■□□□ 1.36
TRBC1P01850 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRBC1P01850 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRBC1P01850 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRBC1P01850 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.54■■□□□ 1.36
TRBC1P01850 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TRBC1P01850 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRBC1P01850 AC090877.2-201ENST00000558441 1738 ntBASIC23.54■■□□□ 1.36
TRBC1P01850 AL031848.2-201ENST00000607670 837 ntBASIC23.54■■□□□ 1.36
TRBC1P01850 MIR6089-201ENST00000616698 64 ntBASIC23.54■■□□□ 1.36
TRBC1P01850 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
TRBC1P01850 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.54■■□□□ 1.36
TRBC1P01850 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
TRBC1P01850 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRBC1P01850 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
TRBC1P01850 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TRBC1P01850 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.53■■□□□ 1.36
TRBC1P01850 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TRBC1P01850 THA1P-201ENST00000590384 1145 ntBASIC23.53■■□□□ 1.36
TRBC1P01850 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TRBC1P01850 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.53■■□□□ 1.36
TRBC1P01850 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TRBC1P01850 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRBC1P01850 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.52■■□□□ 1.36
TRBC1P01850 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRBC1P01850 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
TRBC1P01850 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRBC1P01850 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRBC1P01850 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.51■■□□□ 1.35
TRBC1P01850 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRBC1P01850 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
TRBC1P01850 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRBC1P01850 AC142381.3-201ENST00000568208 1670 ntBASIC23.49■■□□□ 1.35
TRBC1P01850 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.49■■□□□ 1.35
TRBC1P01850 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.49■■□□□ 1.35
TRBC1P01850 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRBC1P01850 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRBC1P01850 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRBC1P01850 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRBC1P01850 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRBC1P01850 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TRBC1P01850 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRBC1P01850 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRBC1P01850 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRBC1P01850 AL451085.2-201ENST00000605085 799 ntBASIC23.48■■□□□ 1.35
TRBC1P01850 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRBC1P01850 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRBC1P01850 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.48■■□□□ 1.35
TRBC1P01850 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.48■■□□□ 1.35
TRBC1P01850 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.47■■□□□ 1.35
TRBC1P01850 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.47■■□□□ 1.35
TRBC1P01850 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.47■■□□□ 1.35
TRBC1P01850 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.47■■□□□ 1.35
TRBC1P01850 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.47■■□□□ 1.35
TRBC1P01850 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.47■■□□□ 1.35
TRBC1P01850 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms