Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LTAP01374 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LTAP01374 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LTAP01374 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LTAP01374 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LTAP01374 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.66■□□□□ 0.42
LTAP01374 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LTAP01374 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.66■□□□□ 0.42
LTAP01374 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LTAP01374 C9orf163-202ENST00000624034 2573 ntBASIC17.66■□□□□ 0.42
LTAP01374 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LTAP01374 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC17.65■□□□□ 0.42
LTAP01374 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LTAP01374 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LTAP01374 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.65■□□□□ 0.42
LTAP01374 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LTAP01374 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC17.65■□□□□ 0.42
LTAP01374 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LTAP01374 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LTAP01374 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LTAP01374 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LTAP01374 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LTAP01374 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LTAP01374 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LTAP01374 CLDN5-201ENST00000403084 2357 ntBASIC17.64■□□□□ 0.41
LTAP01374 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
LTAP01374 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
LTAP01374 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
LTAP01374 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LTAP01374 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LTAP01374 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LTAP01374 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.64■□□□□ 0.41
LTAP01374 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LTAP01374 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LTAP01374 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LTAP01374 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LTAP01374 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC17.63■□□□□ 0.41
LTAP01374 HLA-V-202ENST00000446817 847 ntBASIC17.63■□□□□ 0.41
LTAP01374 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
LTAP01374 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LTAP01374 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
LTAP01374 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LTAP01374 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LTAP01374 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LTAP01374 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LTAP01374 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC17.62■□□□□ 0.41
LTAP01374 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC17.62■□□□□ 0.41
LTAP01374 AC126177.7-201ENST00000547904 679 ntBASIC17.62■□□□□ 0.41
LTAP01374 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LTAP01374 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LTAP01374 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LTAP01374 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LTAP01374 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LTAP01374 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LTAP01374 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LTAP01374 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LTAP01374 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC17.61■□□□□ 0.41
LTAP01374 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LTAP01374 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LTAP01374 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LTAP01374 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LTAP01374 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
LTAP01374 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.6■□□□□ 0.41
LTAP01374 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
LTAP01374 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LTAP01374 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LTAP01374 AL117328.2-201ENST00000624617 1940 ntBASIC17.6■□□□□ 0.41
LTAP01374 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LTAP01374 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LTAP01374 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LTAP01374 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.59■□□□□ 0.41
LTAP01374 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LTAP01374 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LTAP01374 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LTAP01374 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.59■□□□□ 0.41
LTAP01374 HLA-L-211ENST00000482052 1765 ntBASIC17.59■□□□□ 0.41
LTAP01374 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LTAP01374 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LTAP01374 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC17.59■□□□□ 0.41
LTAP01374 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LTAP01374 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LTAP01374 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.59■□□□□ 0.41
LTAP01374 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.59■□□□□ 0.41
LTAP01374 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LTAP01374 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LTAP01374 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.59■□□□□ 0.41
LTAP01374 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
LTAP01374 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.58■□□□□ 0.41
LTAP01374 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
LTAP01374 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LTAP01374 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LTAP01374 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LTAP01374 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
LTAP01374 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LTAP01374 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.58■□□□□ 0.4
LTAP01374 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LTAP01374 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.57■□□□□ 0.4
LTAP01374 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LTAP01374 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LTAP01374 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms