Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TGFAP01135 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.39■□□□□ 0.69
TGFAP01135 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.39■□□□□ 0.69
TGFAP01135 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TGFAP01135 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TGFAP01135 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TGFAP01135 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.39■□□□□ 0.69
TGFAP01135 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TGFAP01135 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TGFAP01135 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.38■□□□□ 0.69
TGFAP01135 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TGFAP01135 AC005837.3-201ENST00000612163 286 ntBASIC19.38■□□□□ 0.69
TGFAP01135 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TGFAP01135 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.37■□□□□ 0.69
TGFAP01135 AF131216.4-201ENST00000638924 1588 ntBASIC19.37■□□□□ 0.69
TGFAP01135 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TGFAP01135 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.37■□□□□ 0.69
TGFAP01135 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TGFAP01135 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TGFAP01135 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.36■□□□□ 0.69
TGFAP01135 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.36■□□□□ 0.69
TGFAP01135 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.36■□□□□ 0.69
TGFAP01135 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.36■□□□□ 0.69
TGFAP01135 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TGFAP01135 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TGFAP01135 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TGFAP01135 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TGFAP01135 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TGFAP01135 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TGFAP01135 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.36■□□□□ 0.69
TGFAP01135 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TGFAP01135 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TGFAP01135 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TGFAP01135 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TGFAP01135 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TGFAP01135 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TGFAP01135 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TGFAP01135 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TGFAP01135 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.34■□□□□ 0.69
TGFAP01135 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TGFAP01135 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.34■□□□□ 0.69
TGFAP01135 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.34■□□□□ 0.69
TGFAP01135 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TGFAP01135 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.33■□□□□ 0.69
TGFAP01135 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TGFAP01135 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.33■□□□□ 0.68
TGFAP01135 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.33■□□□□ 0.68
TGFAP01135 AL512631.2-201ENST00000604634 923 ntBASIC19.33■□□□□ 0.68
TGFAP01135 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.33■□□□□ 0.68
TGFAP01135 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TGFAP01135 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.33■□□□□ 0.68
TGFAP01135 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TGFAP01135 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TGFAP01135 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TGFAP01135 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.32■□□□□ 0.68
TGFAP01135 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TGFAP01135 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.32■□□□□ 0.68
TGFAP01135 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TGFAP01135 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TGFAP01135 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TGFAP01135 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TGFAP01135 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TGFAP01135 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.31■□□□□ 0.68
TGFAP01135 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TGFAP01135 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TGFAP01135 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TGFAP01135 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TGFAP01135 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.31■□□□□ 0.68
TGFAP01135 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.31■□□□□ 0.68
TGFAP01135 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TGFAP01135 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TGFAP01135 AC133561.4-201ENST00000566112 224 ntBASIC19.3■□□□□ 0.68
TGFAP01135 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TGFAP01135 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TGFAP01135 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TGFAP01135 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TGFAP01135 AC090877.2-201ENST00000558441 1738 ntBASIC19.29■□□□□ 0.68
TGFAP01135 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TGFAP01135 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TGFAP01135 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TGFAP01135 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TGFAP01135 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.29■□□□□ 0.68
TGFAP01135 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TGFAP01135 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.29■□□□□ 0.68
TGFAP01135 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TGFAP01135 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.29■□□□□ 0.68
TGFAP01135 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TGFAP01135 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.28■□□□□ 0.68
TGFAP01135 PBX2P1-201ENST00000493219 1291 ntBASIC19.28■□□□□ 0.68
TGFAP01135 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.28■□□□□ 0.68
TGFAP01135 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.28■□□□□ 0.68
TGFAP01135 SHF-206ENST00000560471 2499 ntTSL 5 BASIC19.28■□□□□ 0.68
TGFAP01135 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TGFAP01135 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TGFAP01135 SNX5-217ENST00000606557 1087 ntBASIC19.27■□□□□ 0.68
TGFAP01135 MIR6722-201ENST00000617286 78 ntBASIC19.27■□□□□ 0.68
TGFAP01135 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.27■□□□□ 0.68
TGFAP01135 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TGFAP01135 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TGFAP01135 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms