Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.98■■□□□ 1.11
CLPTM1O96005 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CLPTM1O96005 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLPTM1O96005 CR559946.2-201ENST00000623684 991 ntBASIC21.98■■□□□ 1.11
CLPTM1O96005 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CLPTM1O96005 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLPTM1O96005 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CLPTM1O96005 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CLPTM1O96005 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLPTM1O96005 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CLPTM1O96005 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLPTM1O96005 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLPTM1O96005 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLPTM1O96005 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.97■■□□□ 1.11
CLPTM1O96005 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.97■■□□□ 1.11
CLPTM1O96005 AC016575.1-201ENST00000607026 382 ntBASIC21.97■■□□□ 1.11
CLPTM1O96005 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.97■■□□□ 1.11
CLPTM1O96005 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLPTM1O96005 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CLPTM1O96005 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CLPTM1O96005 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLPTM1O96005 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CLPTM1O96005 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CLPTM1O96005 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.96■■□□□ 1.11
CLPTM1O96005 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.96■■□□□ 1.11
CLPTM1O96005 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.96■■□□□ 1.11
CLPTM1O96005 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLPTM1O96005 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CLPTM1O96005 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CLPTM1O96005 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLPTM1O96005 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLPTM1O96005 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
CLPTM1O96005 HLA-V-202ENST00000446817 847 ntBASIC21.95■■□□□ 1.1
CLPTM1O96005 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.95■■□□□ 1.1
CLPTM1O96005 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLPTM1O96005 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLPTM1O96005 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLPTM1O96005 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLPTM1O96005 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLPTM1O96005 EP400NL-214ENST00000641289 2402 ntBASIC21.95■■□□□ 1.1
CLPTM1O96005 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLPTM1O96005 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CLPTM1O96005 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.94■■□□□ 1.1
CLPTM1O96005 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CLPTM1O96005 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CLPTM1O96005 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.94■■□□□ 1.1
CLPTM1O96005 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
CLPTM1O96005 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLPTM1O96005 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLPTM1O96005 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLPTM1O96005 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLPTM1O96005 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLPTM1O96005 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLPTM1O96005 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CLPTM1O96005 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLPTM1O96005 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLPTM1O96005 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.93■■□□□ 1.1
CLPTM1O96005 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CLPTM1O96005 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.93■■□□□ 1.1
CLPTM1O96005 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CLPTM1O96005 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.93■■□□□ 1.1
CLPTM1O96005 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.93■■□□□ 1.1
CLPTM1O96005 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.92■■□□□ 1.1
CLPTM1O96005 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.92■■□□□ 1.1
CLPTM1O96005 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLPTM1O96005 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CLPTM1O96005 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLPTM1O96005 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.92■■□□□ 1.1
CLPTM1O96005 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.92■■□□□ 1.1
CLPTM1O96005 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.92■■□□□ 1.1
CLPTM1O96005 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLPTM1O96005 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CLPTM1O96005 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLPTM1O96005 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CLPTM1O96005 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CLPTM1O96005 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLPTM1O96005 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLPTM1O96005 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.91■■□□□ 1.1
CLPTM1O96005 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CLPTM1O96005 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.91■■□□□ 1.1
CLPTM1O96005 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.91■■□□□ 1.1
CLPTM1O96005 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.91■■□□□ 1.1
CLPTM1O96005 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CLPTM1O96005 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.91■■□□□ 1.1
CLPTM1O96005 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.91■■□□□ 1.1
CLPTM1O96005 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLPTM1O96005 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CLPTM1O96005 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLPTM1O96005 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CLPTM1O96005 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CLPTM1O96005 ABCB10P4-201ENST00000566803 2184 ntBASIC21.9■■□□□ 1.1
CLPTM1O96005 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLPTM1O96005 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.9■■□□□ 1.1
CLPTM1O96005 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CLPTM1O96005 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CLPTM1O96005 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CLPTM1O96005 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLPTM1O96005 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLPTM1O96005 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLPTM1O96005 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms