Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CDRT1O95170 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDRT1O95170 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDRT1O95170 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDRT1O95170 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CDRT1O95170 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CDRT1O95170 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDRT1O95170 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CDRT1O95170 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.82■□□□□ 0.92
CDRT1O95170 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDRT1O95170 MIR219A2-201ENST00000608502 1504 ntBASIC20.82■□□□□ 0.92
CDRT1O95170 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.81■□□□□ 0.92
CDRT1O95170 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.81■□□□□ 0.92
CDRT1O95170 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CDRT1O95170 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDRT1O95170 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CDRT1O95170 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDRT1O95170 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDRT1O95170 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.81■□□□□ 0.92
CDRT1O95170 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDRT1O95170 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDRT1O95170 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDRT1O95170 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CDRT1O95170 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDRT1O95170 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDRT1O95170 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDRT1O95170 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDRT1O95170 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.8■□□□□ 0.92
CDRT1O95170 AC008813.1-201ENST00000536597 885 ntBASIC20.8■□□□□ 0.92
CDRT1O95170 DUX4L11-201ENST00000611504 1267 ntBASIC20.8■□□□□ 0.92
CDRT1O95170 DUX4L12-201ENST00000614593 1267 ntBASIC20.8■□□□□ 0.92
CDRT1O95170 DUX4L14-201ENST00000621227 1267 ntBASIC20.8■□□□□ 0.92
CDRT1O95170 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDRT1O95170 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.79■□□□□ 0.92
CDRT1O95170 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDRT1O95170 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.79■□□□□ 0.92
CDRT1O95170 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.79■□□□□ 0.92
CDRT1O95170 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDRT1O95170 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDRT1O95170 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDRT1O95170 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDRT1O95170 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDRT1O95170 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDRT1O95170 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CDRT1O95170 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDRT1O95170 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.78■□□□□ 0.92
CDRT1O95170 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDRT1O95170 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CDRT1O95170 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.77■□□□□ 0.92
CDRT1O95170 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.77■□□□□ 0.92
CDRT1O95170 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDRT1O95170 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDRT1O95170 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDRT1O95170 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDRT1O95170 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDRT1O95170 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDRT1O95170 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDRT1O95170 AC148477.6-201ENST00000623746 465 ntBASIC20.76■□□□□ 0.91
CDRT1O95170 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDRT1O95170 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDRT1O95170 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CDRT1O95170 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDRT1O95170 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CDRT1O95170 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDRT1O95170 AL117328.2-201ENST00000624617 1940 ntBASIC20.75■□□□□ 0.91
CDRT1O95170 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDRT1O95170 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDRT1O95170 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
CDRT1O95170 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDRT1O95170 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDRT1O95170 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.74■□□□□ 0.91
CDRT1O95170 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.74■□□□□ 0.91
CDRT1O95170 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
CDRT1O95170 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CDRT1O95170 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CDRT1O95170 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.74■□□□□ 0.91
CDRT1O95170 HLA-V-202ENST00000446817 847 ntBASIC20.74■□□□□ 0.91
CDRT1O95170 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.74■□□□□ 0.91
CDRT1O95170 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDRT1O95170 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.74■□□□□ 0.91
CDRT1O95170 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDRT1O95170 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CDRT1O95170 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDRT1O95170 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDRT1O95170 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDRT1O95170 AL359258.2-201ENST00000564063 1566 ntBASIC20.73■□□□□ 0.91
CDRT1O95170 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDRT1O95170 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDRT1O95170 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.73■□□□□ 0.91
CDRT1O95170 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CDRT1O95170 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.73■□□□□ 0.91
CDRT1O95170 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDRT1O95170 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.73■□□□□ 0.91
CDRT1O95170 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDRT1O95170 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDRT1O95170 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDRT1O95170 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDRT1O95170 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CDRT1O95170 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDRT1O95170 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms