Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNCGO76070 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SNCGO76070 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNCGO76070 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SNCGO76070 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SNCGO76070 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SNCGO76070 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.85■□□□□ 0.13
SNCGO76070 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
SNCGO76070 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SNCGO76070 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SNCGO76070 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
SNCGO76070 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
SNCGO76070 ERN1-208ENST00000606895 2068 ntBASIC15.84■□□□□ 0.13
SNCGO76070 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SNCGO76070 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNCGO76070 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SNCGO76070 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
SNCGO76070 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SNCGO76070 NFIC-211ENST00000641145 8399 ntBASIC15.84■□□□□ 0.13
SNCGO76070 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNCGO76070 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNCGO76070 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SNCGO76070 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SNCGO76070 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SNCGO76070 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SNCGO76070 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNCGO76070 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SNCGO76070 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNCGO76070 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNCGO76070 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNCGO76070 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNCGO76070 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNCGO76070 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC15.82■□□□□ 0.12
SNCGO76070 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNCGO76070 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNCGO76070 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNCGO76070 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNCGO76070 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.82■□□□□ 0.12
SNCGO76070 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SNCGO76070 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SNCGO76070 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNCGO76070 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNCGO76070 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNCGO76070 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC15.81■□□□□ 0.12
SNCGO76070 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SNCGO76070 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SNCGO76070 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNCGO76070 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SNCGO76070 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.81■□□□□ 0.12
SNCGO76070 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
SNCGO76070 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC15.8■□□□□ 0.12
SNCGO76070 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNCGO76070 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
SNCGO76070 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNCGO76070 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNCGO76070 RNF165-205ENST00000588679 2904 ntBASIC15.8■□□□□ 0.12
SNCGO76070 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNCGO76070 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC15.8■□□□□ 0.12
SNCGO76070 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNCGO76070 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNCGO76070 CEBPA-AS1-201ENST00000592982 2198 ntBASIC15.8■□□□□ 0.12
SNCGO76070 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNCGO76070 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNCGO76070 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNCGO76070 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNCGO76070 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC15.8■□□□□ 0.12
SNCGO76070 C9orf163-202ENST00000624034 2573 ntBASIC15.8■□□□□ 0.12
SNCGO76070 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNCGO76070 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNCGO76070 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNCGO76070 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SNCGO76070 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNCGO76070 AC006077.2-201ENST00000623591 457 ntBASIC15.79■□□□□ 0.12
SNCGO76070 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNCGO76070 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNCGO76070 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNCGO76070 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNCGO76070 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNCGO76070 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNCGO76070 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNCGO76070 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNCGO76070 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SNCGO76070 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SNCGO76070 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SNCGO76070 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNCGO76070 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNCGO76070 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNCGO76070 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNCGO76070 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNCGO76070 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNCGO76070 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC15.77■□□□□ 0.12
SNCGO76070 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SNCGO76070 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SNCGO76070 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC15.77■□□□□ 0.12
SNCGO76070 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC15.77■□□□□ 0.11
SNCGO76070 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
SNCGO76070 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SNCGO76070 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC15.77■□□□□ 0.11
SNCGO76070 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
SNCGO76070 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms