Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NDUFS3O75489 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.35■■□□□ 1.33
NDUFS3O75489 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NDUFS3O75489 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NDUFS3O75489 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NDUFS3O75489 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
NDUFS3O75489 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NDUFS3O75489 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.34■■□□□ 1.33
NDUFS3O75489 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.34■■□□□ 1.33
NDUFS3O75489 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
NDUFS3O75489 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NDUFS3O75489 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
NDUFS3O75489 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
NDUFS3O75489 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NDUFS3O75489 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
NDUFS3O75489 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NDUFS3O75489 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.33■■□□□ 1.33
NDUFS3O75489 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
NDUFS3O75489 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.33■■□□□ 1.33
NDUFS3O75489 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
NDUFS3O75489 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.33■■□□□ 1.32
NDUFS3O75489 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NDUFS3O75489 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.32■■□□□ 1.32
NDUFS3O75489 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NDUFS3O75489 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NDUFS3O75489 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
NDUFS3O75489 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
NDUFS3O75489 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.32■■□□□ 1.32
NDUFS3O75489 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.32■■□□□ 1.32
NDUFS3O75489 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NDUFS3O75489 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NDUFS3O75489 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.31■■□□□ 1.32
NDUFS3O75489 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NDUFS3O75489 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NDUFS3O75489 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
NDUFS3O75489 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
NDUFS3O75489 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.31■■□□□ 1.32
NDUFS3O75489 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NDUFS3O75489 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
NDUFS3O75489 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NDUFS3O75489 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NDUFS3O75489 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NDUFS3O75489 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NDUFS3O75489 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NDUFS3O75489 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
NDUFS3O75489 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.3■■□□□ 1.32
NDUFS3O75489 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.3■■□□□ 1.32
NDUFS3O75489 AC139795.1-202ENST00000500444 432 ntBASIC23.3■■□□□ 1.32
NDUFS3O75489 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
NDUFS3O75489 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
NDUFS3O75489 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
NDUFS3O75489 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NDUFS3O75489 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NDUFS3O75489 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
NDUFS3O75489 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NDUFS3O75489 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NDUFS3O75489 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NDUFS3O75489 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NDUFS3O75489 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.28■■□□□ 1.32
NDUFS3O75489 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NDUFS3O75489 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NDUFS3O75489 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NDUFS3O75489 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
NDUFS3O75489 AL592295.1-201ENST00000400984 884 ntBASIC23.28■■□□□ 1.32
NDUFS3O75489 AC004987.1-201ENST00000428627 508 ntBASIC23.28■■□□□ 1.32
NDUFS3O75489 ATP5G2P3-201ENST00000429083 425 ntBASIC23.28■■□□□ 1.32
NDUFS3O75489 LONRF2P2-201ENST00000439212 571 ntBASIC23.28■■□□□ 1.32
NDUFS3O75489 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.28■■□□□ 1.32
NDUFS3O75489 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
NDUFS3O75489 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.28■■□□□ 1.32
NDUFS3O75489 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NDUFS3O75489 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.27■■□□□ 1.32
NDUFS3O75489 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.27■■□□□ 1.32
NDUFS3O75489 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NDUFS3O75489 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
NDUFS3O75489 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
NDUFS3O75489 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NDUFS3O75489 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NDUFS3O75489 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NDUFS3O75489 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NDUFS3O75489 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NDUFS3O75489 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
NDUFS3O75489 LINC01124-201ENST00000409786 2117 ntBASIC23.26■■□□□ 1.31
NDUFS3O75489 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.26■■□□□ 1.31
NDUFS3O75489 BHLHE23-202ENST00000612929 1109 ntBASIC23.26■■□□□ 1.31
NDUFS3O75489 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
NDUFS3O75489 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
NDUFS3O75489 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NDUFS3O75489 AC093323.1-202ENST00000635031 2045 ntBASIC23.26■■□□□ 1.31
NDUFS3O75489 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NDUFS3O75489 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
NDUFS3O75489 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
NDUFS3O75489 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
NDUFS3O75489 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NDUFS3O75489 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.25■■□□□ 1.31
NDUFS3O75489 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NDUFS3O75489 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
NDUFS3O75489 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
NDUFS3O75489 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NDUFS3O75489 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms