Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 YBX1P4-201ENST00000392794 808 ntBASIC21.75■■□□□ 1.07
TRIM3O75382 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM3O75382 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM3O75382 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM3O75382 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM3O75382 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM3O75382 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM3O75382 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.74■■□□□ 1.07
TRIM3O75382 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM3O75382 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM3O75382 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM3O75382 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM3O75382 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM3O75382 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM3O75382 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.73■■□□□ 1.07
TRIM3O75382 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM3O75382 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
TRIM3O75382 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
TRIM3O75382 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM3O75382 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.73■■□□□ 1.07
TRIM3O75382 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM3O75382 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM3O75382 AC010501.1-201ENST00000606270 1962 ntBASIC21.72■■□□□ 1.07
TRIM3O75382 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM3O75382 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
TRIM3O75382 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM3O75382 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM3O75382 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.72■■□□□ 1.07
TRIM3O75382 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM3O75382 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.71■■□□□ 1.07
TRIM3O75382 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM3O75382 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TRIM3O75382 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.71■■□□□ 1.07
TRIM3O75382 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM3O75382 AC096887.2-201ENST00000623443 1957 ntBASIC21.71■■□□□ 1.07
TRIM3O75382 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM3O75382 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
TRIM3O75382 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM3O75382 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM3O75382 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.7■■□□□ 1.06
TRIM3O75382 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.7■■□□□ 1.06
TRIM3O75382 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TRIM3O75382 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.7■■□□□ 1.06
TRIM3O75382 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.7■■□□□ 1.06
TRIM3O75382 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM3O75382 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM3O75382 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM3O75382 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM3O75382 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM3O75382 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM3O75382 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM3O75382 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM3O75382 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM3O75382 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM3O75382 AC022616.5-201ENST00000518796 181 ntBASIC21.68■■□□□ 1.06
TRIM3O75382 AC103724.3-201ENST00000564481 992 ntBASIC21.68■■□□□ 1.06
TRIM3O75382 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM3O75382 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM3O75382 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.68■■□□□ 1.06
TRIM3O75382 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM3O75382 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
TRIM3O75382 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM3O75382 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
TRIM3O75382 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM3O75382 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
TRIM3O75382 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM3O75382 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM3O75382 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM3O75382 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.67■■□□□ 1.06
TRIM3O75382 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM3O75382 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM3O75382 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM3O75382 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.67■■□□□ 1.06
TRIM3O75382 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM3O75382 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TRIM3O75382 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM3O75382 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TRIM3O75382 AL451085.2-201ENST00000605085 799 ntBASIC21.66■■□□□ 1.06
TRIM3O75382 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.66■■□□□ 1.06
TRIM3O75382 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM3O75382 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM3O75382 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM3O75382 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM3O75382 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM3O75382 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TRIM3O75382 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM3O75382 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM3O75382 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
TRIM3O75382 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
TRIM3O75382 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM3O75382 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM3O75382 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM3O75382 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRIM3O75382 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
TRIM3O75382 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM3O75382 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.64■■□□□ 1.05
TRIM3O75382 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM3O75382 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM3O75382 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM3O75382 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms