Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
PRAMEF11O60813 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
PRAMEF11O60813 RARRES2P1-201ENST00000474487 481 ntBASIC23.97■■□□□ 1.43
PRAMEF11O60813 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.97■■□□□ 1.43
PRAMEF11O60813 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.97■■□□□ 1.43
PRAMEF11O60813 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PRAMEF11O60813 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.97■■□□□ 1.43
PRAMEF11O60813 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
PRAMEF11O60813 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PRAMEF11O60813 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PRAMEF11O60813 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.96■■□□□ 1.43
PRAMEF11O60813 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PRAMEF11O60813 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.96■■□□□ 1.43
PRAMEF11O60813 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.96■■□□□ 1.43
PRAMEF11O60813 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
PRAMEF11O60813 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.96■■□□□ 1.43
PRAMEF11O60813 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.96■■□□□ 1.43
PRAMEF11O60813 MIR6089-201ENST00000616698 64 ntBASIC23.96■■□□□ 1.43
PRAMEF11O60813 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PRAMEF11O60813 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PRAMEF11O60813 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PRAMEF11O60813 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PRAMEF11O60813 AC103724.3-201ENST00000564481 992 ntBASIC23.95■■□□□ 1.42
PRAMEF11O60813 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
PRAMEF11O60813 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
PRAMEF11O60813 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PRAMEF11O60813 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
PRAMEF11O60813 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.94■■□□□ 1.42
PRAMEF11O60813 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.94■■□□□ 1.42
PRAMEF11O60813 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PRAMEF11O60813 KRT18P24-201ENST00000344739 1156 ntBASIC23.93■■□□□ 1.42
PRAMEF11O60813 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.93■■□□□ 1.42
PRAMEF11O60813 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
PRAMEF11O60813 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
PRAMEF11O60813 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.93■■□□□ 1.42
PRAMEF11O60813 AC142381.3-201ENST00000568208 1670 ntBASIC23.92■■□□□ 1.42
PRAMEF11O60813 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PRAMEF11O60813 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PRAMEF11O60813 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.92■■□□□ 1.42
PRAMEF11O60813 AC120024.1-201ENST00000562672 995 ntBASIC23.92■■□□□ 1.42
PRAMEF11O60813 AC011551.1-201ENST00000614101 683 ntBASIC23.92■■□□□ 1.42
PRAMEF11O60813 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.92■■□□□ 1.42
PRAMEF11O60813 AC090877.2-201ENST00000558441 1738 ntBASIC23.92■■□□□ 1.42
PRAMEF11O60813 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.91■■□□□ 1.42
PRAMEF11O60813 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
PRAMEF11O60813 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PRAMEF11O60813 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.91■■□□□ 1.42
PRAMEF11O60813 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.91■■□□□ 1.42
PRAMEF11O60813 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PRAMEF11O60813 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PRAMEF11O60813 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PRAMEF11O60813 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PRAMEF11O60813 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PRAMEF11O60813 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PRAMEF11O60813 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
PRAMEF11O60813 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PRAMEF11O60813 THA1P-201ENST00000590384 1145 ntBASIC23.89■■□□□ 1.41
PRAMEF11O60813 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.89■■□□□ 1.41
PRAMEF11O60813 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PRAMEF11O60813 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.89■■□□□ 1.41
PRAMEF11O60813 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
PRAMEF11O60813 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.88■■□□□ 1.41
PRAMEF11O60813 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.88■■□□□ 1.41
PRAMEF11O60813 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PRAMEF11O60813 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PRAMEF11O60813 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.87■■□□□ 1.41
PRAMEF11O60813 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PRAMEF11O60813 AC138932.3-201ENST00000567634 1902 ntBASIC23.87■■□□□ 1.41
PRAMEF11O60813 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PRAMEF11O60813 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PRAMEF11O60813 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PRAMEF11O60813 AL031848.2-201ENST00000607670 837 ntBASIC23.87■■□□□ 1.41
PRAMEF11O60813 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.87■■□□□ 1.41
PRAMEF11O60813 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.87■■□□□ 1.41
PRAMEF11O60813 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PRAMEF11O60813 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PRAMEF11O60813 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PRAMEF11O60813 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
PRAMEF11O60813 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.85■■□□□ 1.41
PRAMEF11O60813 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.85■■□□□ 1.41
PRAMEF11O60813 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.85■■□□□ 1.41
PRAMEF11O60813 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PRAMEF11O60813 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PRAMEF11O60813 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PRAMEF11O60813 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PRAMEF11O60813 AP003733.4-201ENST00000623785 1697 ntBASIC23.83■■□□□ 1.41
PRAMEF11O60813 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.83■■□□□ 1.41
PRAMEF11O60813 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PRAMEF11O60813 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PRAMEF11O60813 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.83■■□□□ 1.41
PRAMEF11O60813 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
PRAMEF11O60813 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PRAMEF11O60813 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.82■■□□□ 1.4
PRAMEF11O60813 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRAMEF11O60813 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRAMEF11O60813 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
PRAMEF11O60813 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRAMEF11O60813 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.82■■□□□ 1.4
PRAMEF11O60813 MIR4281-201ENST00000580852 62 ntBASIC23.82■■□□□ 1.4
PRAMEF11O60813 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms