Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
IDH3BO43837 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.35■■□□□ 1.01
IDH3BO43837 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
IDH3BO43837 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
IDH3BO43837 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
IDH3BO43837 MIR7108-201ENST00000614319 87 ntBASIC21.35■■□□□ 1.01
IDH3BO43837 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.35■■□□□ 1.01
IDH3BO43837 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
IDH3BO43837 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
IDH3BO43837 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
IDH3BO43837 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
IDH3BO43837 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
IDH3BO43837 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.34■■□□□ 1.01
IDH3BO43837 MIR639-201ENST00000384974 98 ntBASIC21.34■■□□□ 1.01
IDH3BO43837 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.34■■□□□ 1.01
IDH3BO43837 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.34■■□□□ 1.01
IDH3BO43837 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
IDH3BO43837 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
IDH3BO43837 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
IDH3BO43837 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
IDH3BO43837 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
IDH3BO43837 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.33■■□□□ 1.01
IDH3BO43837 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.33■■□□□ 1.01
IDH3BO43837 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
IDH3BO43837 ECEL1P2-201ENST00000461596 1295 ntBASIC21.33■■□□□ 1.01
IDH3BO43837 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.33■■□□□ 1.01
IDH3BO43837 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
IDH3BO43837 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.33■■□□□ 1
IDH3BO43837 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.33■■□□□ 1
IDH3BO43837 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
IDH3BO43837 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.32■■□□□ 1
IDH3BO43837 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
IDH3BO43837 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
IDH3BO43837 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
IDH3BO43837 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
IDH3BO43837 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
IDH3BO43837 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.32■■□□□ 1
IDH3BO43837 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
IDH3BO43837 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
IDH3BO43837 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
IDH3BO43837 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
IDH3BO43837 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.31■■□□□ 1
IDH3BO43837 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.31■■□□□ 1
IDH3BO43837 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
IDH3BO43837 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.31■■□□□ 1
IDH3BO43837 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
IDH3BO43837 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
IDH3BO43837 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.3■■□□□ 1
IDH3BO43837 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
IDH3BO43837 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
IDH3BO43837 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
IDH3BO43837 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
IDH3BO43837 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
IDH3BO43837 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
IDH3BO43837 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
IDH3BO43837 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.29■■□□□ 1
IDH3BO43837 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.29■■□□□ 1
IDH3BO43837 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
IDH3BO43837 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.29■■□□□ 1
IDH3BO43837 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.29■■□□□ 1
IDH3BO43837 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
IDH3BO43837 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
IDH3BO43837 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
IDH3BO43837 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.29■■□□□ 1
IDH3BO43837 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
IDH3BO43837 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.28■■□□□ 1
IDH3BO43837 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
IDH3BO43837 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
IDH3BO43837 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.28■■□□□ 1
IDH3BO43837 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
IDH3BO43837 RP9P-202ENST00000450133 1212 ntBASIC21.27■■□□□ 1
IDH3BO43837 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.27■■□□□ 1
IDH3BO43837 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
IDH3BO43837 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.27■■□□□ 1
IDH3BO43837 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
IDH3BO43837 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.27■■□□□ 1
IDH3BO43837 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.27■□□□□ 0.99
IDH3BO43837 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
IDH3BO43837 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
IDH3BO43837 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
IDH3BO43837 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.26■□□□□ 0.99
IDH3BO43837 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
IDH3BO43837 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
IDH3BO43837 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
IDH3BO43837 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
IDH3BO43837 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.25■□□□□ 0.99
IDH3BO43837 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
IDH3BO43837 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
IDH3BO43837 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
IDH3BO43837 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
IDH3BO43837 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
IDH3BO43837 AC022413.1-201ENST00000624602 984 ntBASIC21.25■□□□□ 0.99
IDH3BO43837 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
IDH3BO43837 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
IDH3BO43837 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.25■□□□□ 0.99
IDH3BO43837 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
IDH3BO43837 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
IDH3BO43837 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
IDH3BO43837 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
IDH3BO43837 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms