Protein–RNA interactions for Protein: O15534

PER1, Period circadian protein homolog 1, humanhuman

Predicted RBP Predictions only

Length 1,290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER1O15534 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
PER1O15534 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
PER1O15534 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC32.24■■■□□ 2.75
PER1O15534 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC32.24■■■□□ 2.75
PER1O15534 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC32.24■■■□□ 2.75
PER1O15534 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC32.23■■■□□ 2.75
PER1O15534 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
PER1O15534 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
PER1O15534 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC32.23■■■□□ 2.75
PER1O15534 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC32.23■■■□□ 2.75
PER1O15534 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC32.22■■■□□ 2.75
PER1O15534 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC32.22■■■□□ 2.75
PER1O15534 MED17-227ENST00000640521 2047 ntTSL 5 BASIC32.22■■■□□ 2.75
PER1O15534 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
PER1O15534 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC32.21■■■□□ 2.75
PER1O15534 MIR6089-201ENST00000616698 64 ntBASIC32.21■■■□□ 2.75
PER1O15534 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC32.21■■■□□ 2.75
PER1O15534 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
PER1O15534 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
PER1O15534 KRT18P24-201ENST00000344739 1156 ntBASIC32.2■■■□□ 2.75
PER1O15534 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC32.2■■■□□ 2.75
PER1O15534 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
PER1O15534 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC32.2■■■□□ 2.74
PER1O15534 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
PER1O15534 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC32.19■■■□□ 2.74
PER1O15534 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC32.19■■■□□ 2.74
PER1O15534 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC32.18■■■□□ 2.74
PER1O15534 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC32.18■■■□□ 2.74
PER1O15534 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
PER1O15534 AC120024.1-201ENST00000562672 995 ntBASIC32.17■■■□□ 2.74
PER1O15534 SSSCA1-AS1-201ENST00000567594 614 ntBASIC32.17■■■□□ 2.74
PER1O15534 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC32.16■■■□□ 2.74
PER1O15534 AC138932.3-201ENST00000567634 1902 ntBASIC32.16■■■□□ 2.74
PER1O15534 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC32.16■■■□□ 2.74
PER1O15534 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC32.16■■■□□ 2.74
PER1O15534 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC32.16■■■□□ 2.74
PER1O15534 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
PER1O15534 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
PER1O15534 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
PER1O15534 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC32.15■■■□□ 2.74
PER1O15534 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC32.15■■■□□ 2.74
PER1O15534 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
PER1O15534 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC32.15■■■□□ 2.74
PER1O15534 LSR-205ENST00000427250 1606 ntTSL 2 BASIC32.15■■■□□ 2.74
PER1O15534 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC32.15■■■□□ 2.74
PER1O15534 AC090877.2-201ENST00000558441 1738 ntBASIC32.14■■■□□ 2.74
PER1O15534 YBX1P4-201ENST00000392794 808 ntBASIC32.14■■■□□ 2.74
PER1O15534 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC32.14■■■□□ 2.74
PER1O15534 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC32.13■■■□□ 2.73
PER1O15534 AC142381.3-201ENST00000568208 1670 ntBASIC32.13■■■□□ 2.73
PER1O15534 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC32.12■■■□□ 2.73
PER1O15534 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC32.12■■■□□ 2.73
PER1O15534 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC32.12■■■□□ 2.73
PER1O15534 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
PER1O15534 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC32.12■■■□□ 2.73
PER1O15534 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
PER1O15534 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC32.12■■■□□ 2.73
PER1O15534 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
PER1O15534 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
PER1O15534 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC32.11■■■□□ 2.73
PER1O15534 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
PER1O15534 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC32.11■■■□□ 2.73
PER1O15534 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
PER1O15534 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
PER1O15534 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
PER1O15534 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
PER1O15534 AC011551.1-201ENST00000614101 683 ntBASIC32.1■■■□□ 2.73
PER1O15534 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC32.1■■■□□ 2.73
PER1O15534 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
PER1O15534 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
PER1O15534 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC32.09■■■□□ 2.73
PER1O15534 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
PER1O15534 AL451085.2-201ENST00000605085 799 ntBASIC32.08■■■□□ 2.73
PER1O15534 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC32.08■■■□□ 2.73
PER1O15534 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
PER1O15534 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC32.07■■■□□ 2.72
PER1O15534 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC32.07■■■□□ 2.72
PER1O15534 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC32.07■■■□□ 2.72
PER1O15534 PRTG-204ENST00000561292 833 ntTSL 3 BASIC32.07■■■□□ 2.72
PER1O15534 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC32.07■■■□□ 2.72
PER1O15534 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC32.07■■■□□ 2.72
PER1O15534 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
PER1O15534 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC32.07■■■□□ 2.72
PER1O15534 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
PER1O15534 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC32.06■■■□□ 2.72
PER1O15534 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC32.06■■■□□ 2.72
PER1O15534 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
PER1O15534 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC32.06■■■□□ 2.72
PER1O15534 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
PER1O15534 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC32.05■■■□□ 2.72
PER1O15534 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
PER1O15534 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
PER1O15534 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC32.05■■■□□ 2.72
PER1O15534 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
PER1O15534 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC32.04■■■□□ 2.72
PER1O15534 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC32.04■■■□□ 2.72
PER1O15534 AL031848.2-201ENST00000607670 837 ntBASIC32.04■■■□□ 2.72
PER1O15534 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
PER1O15534 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
PER1O15534 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms