Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.22■■□□□ 1.63
SPTLC1O15269 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
SPTLC1O15269 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
SPTLC1O15269 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SPTLC1O15269 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SPTLC1O15269 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SPTLC1O15269 MIR935-201ENST00000401179 91 ntBASIC25.22■■□□□ 1.63
SPTLC1O15269 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.22■■□□□ 1.63
SPTLC1O15269 SLC6A10P-202ENST00000431994 2058 ntBASIC25.22■■□□□ 1.63
SPTLC1O15269 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.21■■□□□ 1.63
SPTLC1O15269 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC25.21■■□□□ 1.63
SPTLC1O15269 Z92544.1-202ENST00000571933 1220 ntBASIC25.21■■□□□ 1.63
SPTLC1O15269 AC137630.3-201ENST00000607245 391 ntBASIC25.21■■□□□ 1.63
SPTLC1O15269 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SPTLC1O15269 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SPTLC1O15269 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SPTLC1O15269 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.21■■□□□ 1.63
SPTLC1O15269 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SPTLC1O15269 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SPTLC1O15269 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.2■■□□□ 1.62
SPTLC1O15269 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC25.2■■□□□ 1.62
SPTLC1O15269 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.2■■□□□ 1.62
SPTLC1O15269 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
SPTLC1O15269 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SPTLC1O15269 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
SPTLC1O15269 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
SPTLC1O15269 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.19■■□□□ 1.62
SPTLC1O15269 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SPTLC1O15269 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.19■■□□□ 1.62
SPTLC1O15269 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.19■■□□□ 1.62
SPTLC1O15269 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.18■■□□□ 1.62
SPTLC1O15269 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SPTLC1O15269 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SPTLC1O15269 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
SPTLC1O15269 BX664725.1-201ENST00000438252 379 ntBASIC25.17■■□□□ 1.62
SPTLC1O15269 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC25.17■■□□□ 1.62
SPTLC1O15269 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.17■■□□□ 1.62
SPTLC1O15269 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.17■■□□□ 1.62
SPTLC1O15269 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
SPTLC1O15269 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SPTLC1O15269 AC090877.2-201ENST00000558441 1738 ntBASIC25.16■■□□□ 1.62
SPTLC1O15269 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SPTLC1O15269 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SPTLC1O15269 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SPTLC1O15269 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SPTLC1O15269 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SPTLC1O15269 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SPTLC1O15269 CREM-229ENST00000474362 1030 ntTSL 2 BASIC25.15■■□□□ 1.62
SPTLC1O15269 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SPTLC1O15269 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SPTLC1O15269 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SPTLC1O15269 AC021242.3-201ENST00000607598 1377 ntBASIC25.15■■□□□ 1.62
SPTLC1O15269 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SPTLC1O15269 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.15■■□□□ 1.62
SPTLC1O15269 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.14■■□□□ 1.62
SPTLC1O15269 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SPTLC1O15269 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
SPTLC1O15269 AL356441.2-201ENST00000443009 864 ntBASIC25.14■■□□□ 1.62
SPTLC1O15269 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SPTLC1O15269 MIR4787-201ENST00000607364 84 ntBASIC25.14■■□□□ 1.62
SPTLC1O15269 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
SPTLC1O15269 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.14■■□□□ 1.61
SPTLC1O15269 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SPTLC1O15269 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.13■■□□□ 1.61
SPTLC1O15269 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SPTLC1O15269 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SPTLC1O15269 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.13■■□□□ 1.61
SPTLC1O15269 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.13■■□□□ 1.61
SPTLC1O15269 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.12■■□□□ 1.61
SPTLC1O15269 KRT125P-201ENST00000546827 989 ntBASIC25.12■■□□□ 1.61
SPTLC1O15269 AF131216.4-201ENST00000638924 1588 ntBASIC25.12■■□□□ 1.61
SPTLC1O15269 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
SPTLC1O15269 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SPTLC1O15269 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SPTLC1O15269 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SPTLC1O15269 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
SPTLC1O15269 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
SPTLC1O15269 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC25.11■■□□□ 1.61
SPTLC1O15269 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.11■■□□□ 1.61
SPTLC1O15269 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SPTLC1O15269 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SPTLC1O15269 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.1■■□□□ 1.61
SPTLC1O15269 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
SPTLC1O15269 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.1■■□□□ 1.61
SPTLC1O15269 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SPTLC1O15269 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.1■■□□□ 1.61
SPTLC1O15269 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.1■■□□□ 1.61
SPTLC1O15269 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.1■■□□□ 1.61
SPTLC1O15269 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
SPTLC1O15269 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
SPTLC1O15269 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.1■■□□□ 1.61
SPTLC1O15269 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SPTLC1O15269 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
SPTLC1O15269 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SPTLC1O15269 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SPTLC1O15269 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC25.09■■□□□ 1.61
SPTLC1O15269 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SPTLC1O15269 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.09■■□□□ 1.61
SPTLC1O15269 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SPTLC1O15269 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms