Protein–RNA interactions for Protein: O15126

SCAMP1, Secretory carrier-associated membrane protein 1, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1O15126 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SCAMP1O15126 FOXO3B-201ENST00000395675 1928 ntBASIC23.24■■□□□ 1.31
SCAMP1O15126 MIR4281-201ENST00000580852 62 ntBASIC23.24■■□□□ 1.31
SCAMP1O15126 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.24■■□□□ 1.31
SCAMP1O15126 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
SCAMP1O15126 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SCAMP1O15126 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SCAMP1O15126 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SCAMP1O15126 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SCAMP1O15126 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.23■■□□□ 1.31
SCAMP1O15126 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
SCAMP1O15126 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.23■■□□□ 1.31
SCAMP1O15126 AC092028.1-203ENST00000608262 953 ntBASIC23.23■■□□□ 1.31
SCAMP1O15126 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.23■■□□□ 1.31
SCAMP1O15126 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SCAMP1O15126 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SCAMP1O15126 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SCAMP1O15126 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.22■■□□□ 1.31
SCAMP1O15126 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.22■■□□□ 1.31
SCAMP1O15126 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.22■■□□□ 1.31
SCAMP1O15126 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.22■■□□□ 1.31
SCAMP1O15126 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
SCAMP1O15126 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.22■■□□□ 1.31
SCAMP1O15126 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.21■■□□□ 1.31
SCAMP1O15126 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
SCAMP1O15126 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.21■■□□□ 1.31
SCAMP1O15126 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.21■■□□□ 1.31
SCAMP1O15126 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
SCAMP1O15126 AC097639.1-201ENST00000565519 1891 ntBASIC23.21■■□□□ 1.31
SCAMP1O15126 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
SCAMP1O15126 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SCAMP1O15126 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.2■■□□□ 1.3
SCAMP1O15126 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.2■■□□□ 1.3
SCAMP1O15126 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.2■■□□□ 1.3
SCAMP1O15126 AC011551.1-201ENST00000614101 683 ntBASIC23.2■■□□□ 1.3
SCAMP1O15126 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.2■■□□□ 1.3
SCAMP1O15126 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
SCAMP1O15126 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SCAMP1O15126 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.19■■□□□ 1.3
SCAMP1O15126 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SCAMP1O15126 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SCAMP1O15126 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SCAMP1O15126 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
SCAMP1O15126 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.18■■□□□ 1.3
SCAMP1O15126 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SCAMP1O15126 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
SCAMP1O15126 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SCAMP1O15126 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SCAMP1O15126 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.18■■□□□ 1.3
SCAMP1O15126 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SCAMP1O15126 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SCAMP1O15126 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.17■■□□□ 1.3
SCAMP1O15126 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SCAMP1O15126 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.17■■□□□ 1.3
SCAMP1O15126 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
SCAMP1O15126 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SCAMP1O15126 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SCAMP1O15126 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
SCAMP1O15126 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SCAMP1O15126 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SCAMP1O15126 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SCAMP1O15126 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SCAMP1O15126 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.15■■□□□ 1.3
SCAMP1O15126 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SCAMP1O15126 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
SCAMP1O15126 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SCAMP1O15126 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.15■■□□□ 1.3
SCAMP1O15126 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SCAMP1O15126 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SCAMP1O15126 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.14■■□□□ 1.29
SCAMP1O15126 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SCAMP1O15126 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.13■■□□□ 1.29
SCAMP1O15126 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.13■■□□□ 1.29
SCAMP1O15126 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SCAMP1O15126 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.13■■□□□ 1.29
SCAMP1O15126 AC091060.1-201ENST00000623524 1766 ntBASIC23.13■■□□□ 1.29
SCAMP1O15126 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SCAMP1O15126 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SCAMP1O15126 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SCAMP1O15126 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SCAMP1O15126 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.12■■□□□ 1.29
SCAMP1O15126 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SCAMP1O15126 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SCAMP1O15126 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.12■■□□□ 1.29
SCAMP1O15126 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.11■■□□□ 1.29
SCAMP1O15126 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SCAMP1O15126 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.11■■□□□ 1.29
SCAMP1O15126 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.11■■□□□ 1.29
SCAMP1O15126 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.11■■□□□ 1.29
SCAMP1O15126 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.11■■□□□ 1.29
SCAMP1O15126 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SCAMP1O15126 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SCAMP1O15126 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
SCAMP1O15126 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
SCAMP1O15126 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SCAMP1O15126 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.1■■□□□ 1.29
SCAMP1O15126 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.1■■□□□ 1.29
SCAMP1O15126 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SCAMP1O15126 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
SCAMP1O15126 AC010997.5-201ENST00000609182 354 ntBASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms