Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
AP3D1O14617 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
AP3D1O14617 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.78■■□□□ 1.08
AP3D1O14617 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
AP3D1O14617 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.78■■□□□ 1.08
AP3D1O14617 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.78■■□□□ 1.08
AP3D1O14617 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
AP3D1O14617 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
AP3D1O14617 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
AP3D1O14617 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
AP3D1O14617 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
AP3D1O14617 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
AP3D1O14617 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
AP3D1O14617 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
AP3D1O14617 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
AP3D1O14617 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
AP3D1O14617 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.77■■□□□ 1.08
AP3D1O14617 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.77■■□□□ 1.07
AP3D1O14617 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
AP3D1O14617 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
AP3D1O14617 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
AP3D1O14617 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
AP3D1O14617 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
AP3D1O14617 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
AP3D1O14617 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
AP3D1O14617 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
AP3D1O14617 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
AP3D1O14617 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
AP3D1O14617 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.76■■□□□ 1.07
AP3D1O14617 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.76■■□□□ 1.07
AP3D1O14617 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.76■■□□□ 1.07
AP3D1O14617 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
AP3D1O14617 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
AP3D1O14617 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
AP3D1O14617 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
AP3D1O14617 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
AP3D1O14617 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
AP3D1O14617 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.75■■□□□ 1.07
AP3D1O14617 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
AP3D1O14617 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
AP3D1O14617 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
AP3D1O14617 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
AP3D1O14617 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
AP3D1O14617 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
AP3D1O14617 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
AP3D1O14617 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
AP3D1O14617 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
AP3D1O14617 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
AP3D1O14617 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
AP3D1O14617 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
AP3D1O14617 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
AP3D1O14617 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
AP3D1O14617 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
AP3D1O14617 AL592293.1-201ENST00000502889 1188 ntBASIC21.73■■□□□ 1.07
AP3D1O14617 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.73■■□□□ 1.07
AP3D1O14617 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
AP3D1O14617 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
AP3D1O14617 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
AP3D1O14617 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.73■■□□□ 1.07
AP3D1O14617 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
AP3D1O14617 LINC01124-201ENST00000409786 2117 ntBASIC21.73■■□□□ 1.07
AP3D1O14617 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.73■■□□□ 1.07
AP3D1O14617 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
AP3D1O14617 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
AP3D1O14617 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
AP3D1O14617 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
AP3D1O14617 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
AP3D1O14617 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
AP3D1O14617 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
AP3D1O14617 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
AP3D1O14617 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
AP3D1O14617 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
AP3D1O14617 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
AP3D1O14617 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
AP3D1O14617 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
AP3D1O14617 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
AP3D1O14617 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
AP3D1O14617 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.71■■□□□ 1.07
AP3D1O14617 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
AP3D1O14617 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
AP3D1O14617 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.7■■□□□ 1.06
AP3D1O14617 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
AP3D1O14617 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.7■■□□□ 1.06
AP3D1O14617 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
AP3D1O14617 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
AP3D1O14617 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
AP3D1O14617 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
AP3D1O14617 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.69■■□□□ 1.06
AP3D1O14617 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
AP3D1O14617 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
AP3D1O14617 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
AP3D1O14617 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
AP3D1O14617 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.69■■□□□ 1.06
AP3D1O14617 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
AP3D1O14617 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.69■■□□□ 1.06
AP3D1O14617 SPCS2P3-201ENST00000500401 656 ntBASIC21.69■■□□□ 1.06
AP3D1O14617 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.69■■□□□ 1.06
AP3D1O14617 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.69■■□□□ 1.06
AP3D1O14617 U85056.1-201ENST00000616429 682 ntBASIC21.69■■□□□ 1.06
AP3D1O14617 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms