Protein–RNA interactions for Protein: A5X5Y0

HTR3E, 5-hydroxytryptamine receptor 3E, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3EA5X5Y0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HTR3EA5X5Y0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HTR3EA5X5Y0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HTR3EA5X5Y0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HTR3EA5X5Y0 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HTR3EA5X5Y0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HTR3EA5X5Y0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HTR3EA5X5Y0 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HTR3EA5X5Y0 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
HTR3EA5X5Y0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
HTR3EA5X5Y0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HTR3EA5X5Y0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HTR3EA5X5Y0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HTR3EA5X5Y0 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HTR3EA5X5Y0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HTR3EA5X5Y0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.53■■□□□ 1.04
HTR3EA5X5Y0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HTR3EA5X5Y0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HTR3EA5X5Y0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
HTR3EA5X5Y0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
HTR3EA5X5Y0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
HTR3EA5X5Y0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HTR3EA5X5Y0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HTR3EA5X5Y0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
HTR3EA5X5Y0 AC138932.3-201ENST00000567634 1902 ntBASIC21.53■■□□□ 1.04
HTR3EA5X5Y0 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
HTR3EA5X5Y0 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
HTR3EA5X5Y0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.53■■□□□ 1.04
HTR3EA5X5Y0 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HTR3EA5X5Y0 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.52■■□□□ 1.04
HTR3EA5X5Y0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HTR3EA5X5Y0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.52■■□□□ 1.04
HTR3EA5X5Y0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HTR3EA5X5Y0 MIR4449-201ENST00000578365 66 ntBASIC21.52■■□□□ 1.04
HTR3EA5X5Y0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HTR3EA5X5Y0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
HTR3EA5X5Y0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
HTR3EA5X5Y0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.51■■□□□ 1.03
HTR3EA5X5Y0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.51■■□□□ 1.03
HTR3EA5X5Y0 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HTR3EA5X5Y0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HTR3EA5X5Y0 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HTR3EA5X5Y0 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HTR3EA5X5Y0 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HTR3EA5X5Y0 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
HTR3EA5X5Y0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HTR3EA5X5Y0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
HTR3EA5X5Y0 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.51■■□□□ 1.03
HTR3EA5X5Y0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HTR3EA5X5Y0 SLC6A10P-202ENST00000431994 2058 ntBASIC21.51■■□□□ 1.03
HTR3EA5X5Y0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
HTR3EA5X5Y0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
HTR3EA5X5Y0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HTR3EA5X5Y0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
HTR3EA5X5Y0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.5■■□□□ 1.03
HTR3EA5X5Y0 AC093536.1-201ENST00000569153 554 ntBASIC21.5■■□□□ 1.03
HTR3EA5X5Y0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.5■■□□□ 1.03
HTR3EA5X5Y0 AC007029.1-201ENST00000604183 313 ntBASIC21.5■■□□□ 1.03
HTR3EA5X5Y0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HTR3EA5X5Y0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
HTR3EA5X5Y0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
HTR3EA5X5Y0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.5■■□□□ 1.03
HTR3EA5X5Y0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HTR3EA5X5Y0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HTR3EA5X5Y0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
HTR3EA5X5Y0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.49■■□□□ 1.03
HTR3EA5X5Y0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HTR3EA5X5Y0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HTR3EA5X5Y0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
HTR3EA5X5Y0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HTR3EA5X5Y0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.49■■□□□ 1.03
HTR3EA5X5Y0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
HTR3EA5X5Y0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
HTR3EA5X5Y0 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HTR3EA5X5Y0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HTR3EA5X5Y0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
HTR3EA5X5Y0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HTR3EA5X5Y0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.48■■□□□ 1.03
HTR3EA5X5Y0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.48■■□□□ 1.03
HTR3EA5X5Y0 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HTR3EA5X5Y0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
HTR3EA5X5Y0 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
HTR3EA5X5Y0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.47■■□□□ 1.03
HTR3EA5X5Y0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HTR3EA5X5Y0 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HTR3EA5X5Y0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HTR3EA5X5Y0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.47■■□□□ 1.03
HTR3EA5X5Y0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HTR3EA5X5Y0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HTR3EA5X5Y0 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HTR3EA5X5Y0 AL139125.2-201ENST00000623134 1869 ntBASIC21.47■■□□□ 1.03
HTR3EA5X5Y0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HTR3EA5X5Y0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.47■■□□□ 1.03
HTR3EA5X5Y0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HTR3EA5X5Y0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
HTR3EA5X5Y0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.46■■□□□ 1.03
HTR3EA5X5Y0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
HTR3EA5X5Y0 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HTR3EA5X5Y0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HTR3EA5X5Y0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms