Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
HFM1A2PYH4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
HFM1A2PYH4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
HFM1A2PYH4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
HFM1A2PYH4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
HFM1A2PYH4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC35.14■■■■□ 3.22
HFM1A2PYH4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC35.14■■■■□ 3.22
HFM1A2PYH4 BX664725.1-201ENST00000438252 379 ntBASIC35.13■■■■□ 3.21
HFM1A2PYH4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC35.13■■■■□ 3.21
HFM1A2PYH4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC35.13■■■■□ 3.21
HFM1A2PYH4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC35.12■■■■□ 3.21
HFM1A2PYH4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC35.12■■■■□ 3.21
HFM1A2PYH4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC35.12■■■■□ 3.21
HFM1A2PYH4 AC239859.2-201ENST00000444165 318 ntBASIC35.11■■■■□ 3.21
HFM1A2PYH4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC35.11■■■■□ 3.21
HFM1A2PYH4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
HFM1A2PYH4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC35.11■■■■□ 3.21
HFM1A2PYH4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
HFM1A2PYH4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC35.1■■■■□ 3.21
HFM1A2PYH4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC35.1■■■■□ 3.21
HFM1A2PYH4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
HFM1A2PYH4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC35.09■■■■□ 3.21
HFM1A2PYH4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC35.09■■■■□ 3.21
HFM1A2PYH4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC35.09■■■■□ 3.21
HFM1A2PYH4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC35.08■■■■□ 3.21
HFM1A2PYH4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
HFM1A2PYH4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
HFM1A2PYH4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC35.08■■■■□ 3.21
HFM1A2PYH4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC35.08■■■■□ 3.21
HFM1A2PYH4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC35.07■■■■□ 3.21
HFM1A2PYH4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC35.07■■■■□ 3.21
HFM1A2PYH4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC35.07■■■■□ 3.21
HFM1A2PYH4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC35.07■■■■□ 3.21
HFM1A2PYH4 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
HFM1A2PYH4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC35.06■■■■□ 3.2
HFM1A2PYH4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC35.06■■■■□ 3.2
HFM1A2PYH4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC35.06■■■■□ 3.2
HFM1A2PYH4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC35.05■■■■□ 3.2
HFM1A2PYH4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC35.05■■■■□ 3.2
HFM1A2PYH4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC35.05■■■■□ 3.2
HFM1A2PYH4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC35.04■■■■□ 3.2
HFM1A2PYH4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
HFM1A2PYH4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
HFM1A2PYH4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
HFM1A2PYH4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC35.04■■■■□ 3.2
HFM1A2PYH4 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
HFM1A2PYH4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC35.03■■■■□ 3.2
HFM1A2PYH4 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
HFM1A2PYH4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
HFM1A2PYH4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC35.03■■■■□ 3.2
HFM1A2PYH4 MIR4787-201ENST00000607364 84 ntBASIC35.03■■■■□ 3.2
HFM1A2PYH4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
HFM1A2PYH4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
HFM1A2PYH4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
HFM1A2PYH4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
HFM1A2PYH4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
HFM1A2PYH4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC35.02■■■■□ 3.2
HFM1A2PYH4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC35.02■■■■□ 3.2
HFM1A2PYH4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC35.02■■■■□ 3.2
HFM1A2PYH4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC35.02■■■■□ 3.2
HFM1A2PYH4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
HFM1A2PYH4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC35.01■■■■□ 3.19
HFM1A2PYH4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.19
HFM1A2PYH4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC35■■■■□ 3.19
HFM1A2PYH4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC35■■■■□ 3.19
HFM1A2PYH4 KRT125P-201ENST00000546827 989 ntBASIC35■■■■□ 3.19
HFM1A2PYH4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
HFM1A2PYH4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC35■■■■□ 3.19
HFM1A2PYH4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC35■■■■□ 3.19
HFM1A2PYH4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
HFM1A2PYH4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC34.99■■■■□ 3.19
HFM1A2PYH4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC34.99■■■■□ 3.19
HFM1A2PYH4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC34.99■■■■□ 3.19
HFM1A2PYH4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC34.99■■■■□ 3.19
HFM1A2PYH4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
HFM1A2PYH4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
HFM1A2PYH4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
HFM1A2PYH4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC34.99■■■■□ 3.19
HFM1A2PYH4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC34.98■■■■□ 3.19
HFM1A2PYH4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC34.98■■■■□ 3.19
HFM1A2PYH4 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
HFM1A2PYH4 UNC93B8-201ENST00000511903 705 ntBASIC34.98■■■■□ 3.19
HFM1A2PYH4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC34.98■■■■□ 3.19
HFM1A2PYH4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC34.98■■■■□ 3.19
HFM1A2PYH4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC34.98■■■■□ 3.19
HFM1A2PYH4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
HFM1A2PYH4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC34.98■■■■□ 3.19
HFM1A2PYH4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC34.98■■■■□ 3.19
HFM1A2PYH4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC34.98■■■■□ 3.19
HFM1A2PYH4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC34.97■■■■□ 3.19
HFM1A2PYH4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC34.97■■■■□ 3.19
HFM1A2PYH4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC34.97■■■■□ 3.19
HFM1A2PYH4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC34.97■■■■□ 3.19
HFM1A2PYH4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC34.97■■■■□ 3.19
HFM1A2PYH4 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC34.96■■■■□ 3.19
HFM1A2PYH4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC34.96■■■■□ 3.19
HFM1A2PYH4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
HFM1A2PYH4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC34.96■■■■□ 3.19
HFM1A2PYH4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC34.96■■■■□ 3.19
HFM1A2PYH4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms