Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 RARRES2P2-201ENST00000394842 485 ntBASIC16.82■□□□□ 0.28
TRAV4A0A0B4J268 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAV4A0A0B4J268 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV4A0A0B4J268 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV4A0A0B4J268 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAV4A0A0B4J268 AL139125.2-201ENST00000623134 1869 ntBASIC16.82■□□□□ 0.28
TRAV4A0A0B4J268 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAV4A0A0B4J268 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV4A0A0B4J268 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV4A0A0B4J268 HSD17B1P1-201ENST00000590052 955 ntBASIC16.81■□□□□ 0.28
TRAV4A0A0B4J268 EED-207ENST00000528180 1745 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAV4A0A0B4J268 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV4A0A0B4J268 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV4A0A0B4J268 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV4A0A0B4J268 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV4A0A0B4J268 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV4A0A0B4J268 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV4A0A0B4J268 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC16.8■□□□□ 0.28
TRAV4A0A0B4J268 HYI-213ENST00000583037 1322 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAV4A0A0B4J268 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV4A0A0B4J268 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV4A0A0B4J268 MIR6089-201ENST00000616698 64 ntBASIC16.8■□□□□ 0.28
TRAV4A0A0B4J268 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAV4A0A0B4J268 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV4A0A0B4J268 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV4A0A0B4J268 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV4A0A0B4J268 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV4A0A0B4J268 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRAV4A0A0B4J268 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV4A0A0B4J268 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV4A0A0B4J268 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TRAV4A0A0B4J268 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV4A0A0B4J268 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV4A0A0B4J268 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRAV4A0A0B4J268 AC018755.3-202ENST00000596210 929 ntBASIC16.79■□□□□ 0.28
TRAV4A0A0B4J268 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV4A0A0B4J268 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV4A0A0B4J268 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV4A0A0B4J268 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV4A0A0B4J268 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV4A0A0B4J268 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV4A0A0B4J268 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV4A0A0B4J268 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV4A0A0B4J268 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV4A0A0B4J268 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAV4A0A0B4J268 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAV4A0A0B4J268 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV4A0A0B4J268 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAV4A0A0B4J268 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAV4A0A0B4J268 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV4A0A0B4J268 AL592293.1-201ENST00000502889 1188 ntBASIC16.78■□□□□ 0.28
TRAV4A0A0B4J268 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TRAV4A0A0B4J268 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAV4A0A0B4J268 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV4A0A0B4J268 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV4A0A0B4J268 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV4A0A0B4J268 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV4A0A0B4J268 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV4A0A0B4J268 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC16.77■□□□□ 0.28
TRAV4A0A0B4J268 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV4A0A0B4J268 FOXO3B-201ENST00000395675 1928 ntBASIC16.77■□□□□ 0.28
TRAV4A0A0B4J268 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC16.77■□□□□ 0.28
TRAV4A0A0B4J268 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV4A0A0B4J268 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV4A0A0B4J268 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC16.77■□□□□ 0.28
TRAV4A0A0B4J268 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV4A0A0B4J268 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC16.77■□□□□ 0.28
TRAV4A0A0B4J268 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV4A0A0B4J268 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
TRAV4A0A0B4J268 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
TRAV4A0A0B4J268 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
TRAV4A0A0B4J268 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC16.77■□□□□ 0.27
TRAV4A0A0B4J268 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV4A0A0B4J268 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TRAV4A0A0B4J268 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV4A0A0B4J268 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV4A0A0B4J268 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV4A0A0B4J268 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV4A0A0B4J268 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV4A0A0B4J268 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV4A0A0B4J268 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV4A0A0B4J268 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV4A0A0B4J268 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC16.75■□□□□ 0.27
TRAV4A0A0B4J268 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC16.75■□□□□ 0.27
TRAV4A0A0B4J268 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV4A0A0B4J268 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV4A0A0B4J268 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV4A0A0B4J268 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV4A0A0B4J268 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV4A0A0B4J268 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC16.75■□□□□ 0.27
TRAV4A0A0B4J268 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV4A0A0B4J268 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV4A0A0B4J268 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV4A0A0B4J268 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV4A0A0B4J268 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV4A0A0B4J268 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAV4A0A0B4J268 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV4A0A0B4J268 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAV4A0A0B4J268 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV4A0A0B4J268 RPS2P7-201ENST00000447334 885 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms