Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TRAV5A0A0B4J249 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.19■□□□□ 0.5
TRAV5A0A0B4J249 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV5A0A0B4J249 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV5A0A0B4J249 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV5A0A0B4J249 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV5A0A0B4J249 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV5A0A0B4J249 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRAV5A0A0B4J249 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV5A0A0B4J249 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV5A0A0B4J249 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV5A0A0B4J249 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV5A0A0B4J249 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAV5A0A0B4J249 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV5A0A0B4J249 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAV5A0A0B4J249 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV5A0A0B4J249 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV5A0A0B4J249 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV5A0A0B4J249 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV5A0A0B4J249 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV5A0A0B4J249 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRAV5A0A0B4J249 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV5A0A0B4J249 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV5A0A0B4J249 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAV5A0A0B4J249 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV5A0A0B4J249 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV5A0A0B4J249 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV5A0A0B4J249 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV5A0A0B4J249 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV5A0A0B4J249 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.16■□□□□ 0.5
TRAV5A0A0B4J249 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAV5A0A0B4J249 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV5A0A0B4J249 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV5A0A0B4J249 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV5A0A0B4J249 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TRAV5A0A0B4J249 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV5A0A0B4J249 DUSP8P5-201ENST00000422884 1815 ntBASIC18.15■□□□□ 0.5
TRAV5A0A0B4J249 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TRAV5A0A0B4J249 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV5A0A0B4J249 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TRAV5A0A0B4J249 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
TRAV5A0A0B4J249 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV5A0A0B4J249 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV5A0A0B4J249 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.14■□□□□ 0.49
TRAV5A0A0B4J249 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAV5A0A0B4J249 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.14■□□□□ 0.49
TRAV5A0A0B4J249 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV5A0A0B4J249 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.14■□□□□ 0.49
TRAV5A0A0B4J249 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV5A0A0B4J249 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV5A0A0B4J249 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV5A0A0B4J249 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.13■□□□□ 0.49
TRAV5A0A0B4J249 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV5A0A0B4J249 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV5A0A0B4J249 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
TRAV5A0A0B4J249 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TRAV5A0A0B4J249 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV5A0A0B4J249 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV5A0A0B4J249 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.13■□□□□ 0.49
TRAV5A0A0B4J249 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV5A0A0B4J249 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV5A0A0B4J249 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.12■□□□□ 0.49
TRAV5A0A0B4J249 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV5A0A0B4J249 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TRAV5A0A0B4J249 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.12■□□□□ 0.49
TRAV5A0A0B4J249 AL157400.5-201ENST00000507624 621 ntBASIC18.12■□□□□ 0.49
TRAV5A0A0B4J249 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC18.12■□□□□ 0.49
TRAV5A0A0B4J249 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.12■□□□□ 0.49
TRAV5A0A0B4J249 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV5A0A0B4J249 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV5A0A0B4J249 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV5A0A0B4J249 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV5A0A0B4J249 MIR3648-2-201ENST00000581792 180 ntBASIC18.11■□□□□ 0.49
TRAV5A0A0B4J249 MIR3648-1-201ENST00000615959 180 ntBASIC18.11■□□□□ 0.49
TRAV5A0A0B4J249 MIR6089-201ENST00000616698 64 ntBASIC18.11■□□□□ 0.49
TRAV5A0A0B4J249 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.11■□□□□ 0.49
TRAV5A0A0B4J249 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
TRAV5A0A0B4J249 AC025884.2-201ENST00000553429 711 ntBASIC18.1■□□□□ 0.49
TRAV5A0A0B4J249 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.1■□□□□ 0.49
TRAV5A0A0B4J249 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV5A0A0B4J249 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV5A0A0B4J249 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV5A0A0B4J249 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV5A0A0B4J249 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TRAV5A0A0B4J249 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAV5A0A0B4J249 C9orf163-202ENST00000624034 2573 ntBASIC18.09■□□□□ 0.49
TRAV5A0A0B4J249 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV5A0A0B4J249 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV5A0A0B4J249 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV5A0A0B4J249 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAV5A0A0B4J249 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV5A0A0B4J249 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV5A0A0B4J249 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV5A0A0B4J249 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAV5A0A0B4J249 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV5A0A0B4J249 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV5A0A0B4J249 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
TRAV5A0A0B4J249 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV5A0A0B4J249 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV5A0A0B4J249 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms