Protein–RNA interactions for Protein: A0A0A6YYJ0

MSANTD3-TMEFF1, Protein MSANTD3-TMEFF1, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3-TMEFF1A0A0A6YYJ0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.42■■□□□ 1.34
MSANTD3-TMEFF1A0A0A6YYJ0 AC106739.1-201ENST00000617035 715 ntBASIC23.42■■□□□ 1.34
MSANTD3-TMEFF1A0A0A6YYJ0 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
MSANTD3-TMEFF1A0A0A6YYJ0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
MSANTD3-TMEFF1A0A0A6YYJ0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
MSANTD3-TMEFF1A0A0A6YYJ0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
MSANTD3-TMEFF1A0A0A6YYJ0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
MSANTD3-TMEFF1A0A0A6YYJ0 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
MSANTD3-TMEFF1A0A0A6YYJ0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
MSANTD3-TMEFF1A0A0A6YYJ0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.41■■□□□ 1.34
MSANTD3-TMEFF1A0A0A6YYJ0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.41■■□□□ 1.34
MSANTD3-TMEFF1A0A0A6YYJ0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
MSANTD3-TMEFF1A0A0A6YYJ0 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
MSANTD3-TMEFF1A0A0A6YYJ0 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.4■■□□□ 1.34
MSANTD3-TMEFF1A0A0A6YYJ0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
MSANTD3-TMEFF1A0A0A6YYJ0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
MSANTD3-TMEFF1A0A0A6YYJ0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.4■■□□□ 1.34
MSANTD3-TMEFF1A0A0A6YYJ0 AC142381.2-201ENST00000566120 298 ntBASIC23.4■■□□□ 1.34
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
MSANTD3-TMEFF1A0A0A6YYJ0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
MSANTD3-TMEFF1A0A0A6YYJ0 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
MSANTD3-TMEFF1A0A0A6YYJ0 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
MSANTD3-TMEFF1A0A0A6YYJ0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.39■■□□□ 1.34
MSANTD3-TMEFF1A0A0A6YYJ0 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
MSANTD3-TMEFF1A0A0A6YYJ0 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.39■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.38■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 UNC93B3-201ENST00000308076 687 ntBASIC23.38■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 SNX5-217ENST00000606557 1087 ntBASIC23.38■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.37■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.36■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.36■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.35■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.35■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 MIR6722-201ENST00000617286 78 ntBASIC23.35■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.35■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.35■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.34■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.34■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.34■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 RARRES2P6-201ENST00000567333 442 ntBASIC23.34■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 AL136162.1-201ENST00000607711 1078 ntBASIC23.34■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 AC090877.2-201ENST00000558441 1738 ntBASIC23.33■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.33■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.33■■□□□ 1.33
MSANTD3-TMEFF1A0A0A6YYJ0 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.33■■□□□ 1.32
MSANTD3-TMEFF1A0A0A6YYJ0 AC142086.6-201ENST00000621154 1765 ntBASIC23.32■■□□□ 1.32
MSANTD3-TMEFF1A0A0A6YYJ0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
MSANTD3-TMEFF1A0A0A6YYJ0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
MSANTD3-TMEFF1A0A0A6YYJ0 AC092666.2-201ENST00000613287 246 ntBASIC23.32■■□□□ 1.32
MSANTD3-TMEFF1A0A0A6YYJ0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
MSANTD3-TMEFF1A0A0A6YYJ0 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
MSANTD3-TMEFF1A0A0A6YYJ0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
MSANTD3-TMEFF1A0A0A6YYJ0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
MSANTD3-TMEFF1A0A0A6YYJ0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
MSANTD3-TMEFF1A0A0A6YYJ0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
MSANTD3-TMEFF1A0A0A6YYJ0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.31■■□□□ 1.32
MSANTD3-TMEFF1A0A0A6YYJ0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.31■■□□□ 1.32
MSANTD3-TMEFF1A0A0A6YYJ0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
MSANTD3-TMEFF1A0A0A6YYJ0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
MSANTD3-TMEFF1A0A0A6YYJ0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.3■■□□□ 1.32
MSANTD3-TMEFF1A0A0A6YYJ0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.3■■□□□ 1.32
MSANTD3-TMEFF1A0A0A6YYJ0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.3■■□□□ 1.32
MSANTD3-TMEFF1A0A0A6YYJ0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.3■■□□□ 1.32
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
MSANTD3-TMEFF1A0A0A6YYJ0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
MSANTD3-TMEFF1A0A0A6YYJ0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
MSANTD3-TMEFF1A0A0A6YYJ0 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
MSANTD3-TMEFF1A0A0A6YYJ0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
MSANTD3-TMEFF1A0A0A6YYJ0 AL031432.3-201ENST00000607698 485 ntBASIC23.29■■□□□ 1.32
MSANTD3-TMEFF1A0A0A6YYJ0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.29■■□□□ 1.32
MSANTD3-TMEFF1A0A0A6YYJ0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.29■■□□□ 1.32
MSANTD3-TMEFF1A0A0A6YYJ0 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
MSANTD3-TMEFF1A0A0A6YYJ0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
MSANTD3-TMEFF1A0A0A6YYJ0 AC135279.3-201ENST00000610945 1311 ntBASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms