Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV30A0A087WSZ9 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV30A0A087WSZ9 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV30A0A087WSZ9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV30A0A087WSZ9 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV30A0A087WSZ9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TRAV30A0A087WSZ9 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV30A0A087WSZ9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV30A0A087WSZ9 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.34■□□□□ 0.53
TRAV30A0A087WSZ9 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAV30A0A087WSZ9 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
TRAV30A0A087WSZ9 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV30A0A087WSZ9 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV30A0A087WSZ9 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV30A0A087WSZ9 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TRAV30A0A087WSZ9 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
TRAV30A0A087WSZ9 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.34■□□□□ 0.53
TRAV30A0A087WSZ9 RAP2CP1-202ENST00000605179 643 ntBASIC18.34■□□□□ 0.53
TRAV30A0A087WSZ9 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TRAV30A0A087WSZ9 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.34■□□□□ 0.53
TRAV30A0A087WSZ9 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV30A0A087WSZ9 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV30A0A087WSZ9 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV30A0A087WSZ9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV30A0A087WSZ9 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV30A0A087WSZ9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV30A0A087WSZ9 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.33■□□□□ 0.52
TRAV30A0A087WSZ9 MIR6089-201ENST00000616698 64 ntBASIC18.33■□□□□ 0.52
TRAV30A0A087WSZ9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.33■□□□□ 0.52
TRAV30A0A087WSZ9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TRAV30A0A087WSZ9 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV30A0A087WSZ9 LINC01124-201ENST00000409786 2117 ntBASIC18.32■□□□□ 0.52
TRAV30A0A087WSZ9 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.32■□□□□ 0.52
TRAV30A0A087WSZ9 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV30A0A087WSZ9 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.32■□□□□ 0.52
TRAV30A0A087WSZ9 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.32■□□□□ 0.52
TRAV30A0A087WSZ9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.32■□□□□ 0.52
TRAV30A0A087WSZ9 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TRAV30A0A087WSZ9 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV30A0A087WSZ9 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TRAV30A0A087WSZ9 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV30A0A087WSZ9 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV30A0A087WSZ9 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV30A0A087WSZ9 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV30A0A087WSZ9 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV30A0A087WSZ9 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRAV30A0A087WSZ9 AC026202.3-201ENST00000600805 1127 ntBASIC18.31■□□□□ 0.52
TRAV30A0A087WSZ9 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAV30A0A087WSZ9 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TRAV30A0A087WSZ9 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV30A0A087WSZ9 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TRAV30A0A087WSZ9 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.3■□□□□ 0.52
TRAV30A0A087WSZ9 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV30A0A087WSZ9 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TRAV30A0A087WSZ9 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV30A0A087WSZ9 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV30A0A087WSZ9 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV30A0A087WSZ9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TRAV30A0A087WSZ9 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV30A0A087WSZ9 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV30A0A087WSZ9 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV30A0A087WSZ9 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV30A0A087WSZ9 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV30A0A087WSZ9 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV30A0A087WSZ9 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TRAV30A0A087WSZ9 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV30A0A087WSZ9 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV30A0A087WSZ9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TRAV30A0A087WSZ9 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV30A0A087WSZ9 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV30A0A087WSZ9 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV30A0A087WSZ9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV30A0A087WSZ9 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV30A0A087WSZ9 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV30A0A087WSZ9 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV30A0A087WSZ9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV30A0A087WSZ9 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV30A0A087WSZ9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV30A0A087WSZ9 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TRAV30A0A087WSZ9 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.27■□□□□ 0.52
TRAV30A0A087WSZ9 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV30A0A087WSZ9 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.27■□□□□ 0.51
TRAV30A0A087WSZ9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV30A0A087WSZ9 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV30A0A087WSZ9 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAV30A0A087WSZ9 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV30A0A087WSZ9 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV30A0A087WSZ9 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.26■□□□□ 0.51
TRAV30A0A087WSZ9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV30A0A087WSZ9 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV30A0A087WSZ9 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRAV30A0A087WSZ9 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV30A0A087WSZ9 AC133552.2-201ENST00000619106 1032 ntBASIC18.25■□□□□ 0.51
TRAV30A0A087WSZ9 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
TRAV30A0A087WSZ9 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV30A0A087WSZ9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV30A0A087WSZ9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV30A0A087WSZ9 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV30A0A087WSZ9 FOXO3B-201ENST00000395675 1928 ntBASIC18.25■□□□□ 0.51
TRAV30A0A087WSZ9 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms