Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV9-1A0A075B6T8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
TRAV9-1A0A075B6T8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV9-1A0A075B6T8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV9-1A0A075B6T8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV9-1A0A075B6T8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV9-1A0A075B6T8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAV9-1A0A075B6T8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV9-1A0A075B6T8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV9-1A0A075B6T8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV9-1A0A075B6T8 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC17.65■□□□□ 0.42
TRAV9-1A0A075B6T8 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.65■□□□□ 0.42
TRAV9-1A0A075B6T8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAV9-1A0A075B6T8 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV9-1A0A075B6T8 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV9-1A0A075B6T8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV9-1A0A075B6T8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV9-1A0A075B6T8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAV9-1A0A075B6T8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV9-1A0A075B6T8 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV9-1A0A075B6T8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV9-1A0A075B6T8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV9-1A0A075B6T8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAV9-1A0A075B6T8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV9-1A0A075B6T8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV9-1A0A075B6T8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV9-1A0A075B6T8 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV9-1A0A075B6T8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV9-1A0A075B6T8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV9-1A0A075B6T8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV9-1A0A075B6T8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV9-1A0A075B6T8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV9-1A0A075B6T8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV9-1A0A075B6T8 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV9-1A0A075B6T8 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV9-1A0A075B6T8 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAV9-1A0A075B6T8 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAV9-1A0A075B6T8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.63■□□□□ 0.41
TRAV9-1A0A075B6T8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV9-1A0A075B6T8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV9-1A0A075B6T8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV9-1A0A075B6T8 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRAV9-1A0A075B6T8 ECEL1P1-201ENST00000373592 1742 ntBASIC17.62■□□□□ 0.41
TRAV9-1A0A075B6T8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAV9-1A0A075B6T8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV9-1A0A075B6T8 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAV9-1A0A075B6T8 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV9-1A0A075B6T8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAV9-1A0A075B6T8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV9-1A0A075B6T8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV9-1A0A075B6T8 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV9-1A0A075B6T8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV9-1A0A075B6T8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
TRAV9-1A0A075B6T8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV9-1A0A075B6T8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV9-1A0A075B6T8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV9-1A0A075B6T8 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV9-1A0A075B6T8 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV9-1A0A075B6T8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV9-1A0A075B6T8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TRAV9-1A0A075B6T8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV9-1A0A075B6T8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV9-1A0A075B6T8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV9-1A0A075B6T8 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV9-1A0A075B6T8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV9-1A0A075B6T8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAV9-1A0A075B6T8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV9-1A0A075B6T8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.6■□□□□ 0.41
TRAV9-1A0A075B6T8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV9-1A0A075B6T8 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV9-1A0A075B6T8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV9-1A0A075B6T8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TRAV9-1A0A075B6T8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV9-1A0A075B6T8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV9-1A0A075B6T8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAV9-1A0A075B6T8 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV9-1A0A075B6T8 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC17.58■□□□□ 0.41
TRAV9-1A0A075B6T8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV9-1A0A075B6T8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.58■□□□□ 0.4
TRAV9-1A0A075B6T8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC17.58■□□□□ 0.4
TRAV9-1A0A075B6T8 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV9-1A0A075B6T8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV9-1A0A075B6T8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV9-1A0A075B6T8 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV9-1A0A075B6T8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRAV9-1A0A075B6T8 GUSBP5-202ENST00000510805 1989 ntBASIC17.57■□□□□ 0.4
TRAV9-1A0A075B6T8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC17.57■□□□□ 0.4
TRAV9-1A0A075B6T8 DUSP8P3-201ENST00000399571 1760 ntBASIC17.57■□□□□ 0.4
TRAV9-1A0A075B6T8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRAV9-1A0A075B6T8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TRAV9-1A0A075B6T8 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV9-1A0A075B6T8 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV9-1A0A075B6T8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRAV9-1A0A075B6T8 FOXO3B-201ENST00000395675 1928 ntBASIC17.57■□□□□ 0.4
TRAV9-1A0A075B6T8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV9-1A0A075B6T8 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV9-1A0A075B6T8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV9-1A0A075B6T8 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV9-1A0A075B6T8 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV9-1A0A075B6T8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms