Protein–RNA interactions for Protein: A0A075B6M9

TRBV23OR9-2, T-cell receptor beta variable 23/OR9-2 (pseudogene) (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23OR9-2A0A075B6M9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.95■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.94■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.94■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 TSPY9P-201ENST00000440215 945 ntBASIC22.94■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 TSPY11P-201ENST00000442607 1045 ntBASIC22.94■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.93■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.93■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.93■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.93■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.93■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.92■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.92■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.92■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.92■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 UNC93B8-201ENST00000511903 705 ntBASIC22.91■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 AC021242.3-201ENST00000607598 1377 ntBASIC22.9■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.9■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.9■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.9■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 DUSP8P4-201ENST00000399538 1761 ntBASIC22.9■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.9■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
TRBV23OR9-2A0A075B6M9 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 AC011551.1-201ENST00000614101 683 ntBASIC22.89■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.88■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.88■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.88■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.88■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 AC145676.1-201ENST00000514988 2004 ntBASIC22.87■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.87■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.86■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.86■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 AC090877.2-201ENST00000558441 1738 ntBASIC22.85■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.85■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.85■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.85■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 AC092028.1-203ENST00000608262 953 ntBASIC22.85■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.85■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 KRT16P3-201ENST00000439127 1283 ntBASIC22.84■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.83■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.83■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.83■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.83■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TRBV23OR9-2A0A075B6M9 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.83■■□□□ 1.24
TRBV23OR9-2A0A075B6M9 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRBV23OR9-2A0A075B6M9 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRBV23OR9-2A0A075B6M9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.82■■□□□ 1.24
TRBV23OR9-2A0A075B6M9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRBV23OR9-2A0A075B6M9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.82■■□□□ 1.24
TRBV23OR9-2A0A075B6M9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TRBV23OR9-2A0A075B6M9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
TRBV23OR9-2A0A075B6M9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.82■■□□□ 1.24
TRBV23OR9-2A0A075B6M9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms