Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
PCDHA13Q9Y5I0 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.86■■■□□ 2.53
PCDHA13Q9Y5I0 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PCDHA13Q9Y5I0 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
PCDHA13Q9Y5I0 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
PCDHA13Q9Y5I0 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC30.78■■■□□ 2.52
PCDHA13Q9Y5I0 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.77■■■□□ 2.52
PCDHA13Q9Y5I0 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.77■■■□□ 2.52
PCDHA13Q9Y5I0 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PCDHA13Q9Y5I0 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
PCDHA13Q9Y5I0 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PCDHA13Q9Y5I0 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
PCDHA13Q9Y5I0 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.71■■■□□ 2.51
PCDHA13Q9Y5I0 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
PCDHA13Q9Y5I0 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PCDHA13Q9Y5I0 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
PCDHA13Q9Y5I0 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.68■■■□□ 2.5
PCDHA13Q9Y5I0 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.68■■■□□ 2.5
PCDHA13Q9Y5I0 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PCDHA13Q9Y5I0 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.64■■■□□ 2.5
PCDHA13Q9Y5I0 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.64■■■□□ 2.5
PCDHA13Q9Y5I0 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC30.64■■■□□ 2.5
PCDHA13Q9Y5I0 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
PCDHA13Q9Y5I0 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
PCDHA13Q9Y5I0 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
PCDHA13Q9Y5I0 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
PCDHA13Q9Y5I0 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PCDHA13Q9Y5I0 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PCDHA13Q9Y5I0 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
PCDHA13Q9Y5I0 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.56■■■□□ 2.48
PCDHA13Q9Y5I0 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.56■■■□□ 2.48
PCDHA13Q9Y5I0 AC015813.7-201ENST00000623294 581 ntBASIC30.56■■■□□ 2.48
PCDHA13Q9Y5I0 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PCDHA13Q9Y5I0 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
PCDHA13Q9Y5I0 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
PCDHA13Q9Y5I0 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
PCDHA13Q9Y5I0 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
PCDHA13Q9Y5I0 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
PCDHA13Q9Y5I0 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
PCDHA13Q9Y5I0 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
PCDHA13Q9Y5I0 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
PCDHA13Q9Y5I0 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
PCDHA13Q9Y5I0 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.44■■■□□ 2.46
PCDHA13Q9Y5I0 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
PCDHA13Q9Y5I0 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
PCDHA13Q9Y5I0 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.41■■■□□ 2.46
PCDHA13Q9Y5I0 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
PCDHA13Q9Y5I0 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
PCDHA13Q9Y5I0 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
PCDHA13Q9Y5I0 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
PCDHA13Q9Y5I0 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
PCDHA13Q9Y5I0 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
PCDHA13Q9Y5I0 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
PCDHA13Q9Y5I0 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
PCDHA13Q9Y5I0 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PCDHA13Q9Y5I0 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
PCDHA13Q9Y5I0 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
PCDHA13Q9Y5I0 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
PCDHA13Q9Y5I0 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
PCDHA13Q9Y5I0 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.25■■■□□ 2.43
PCDHA13Q9Y5I0 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.23■■■□□ 2.43
PCDHA13Q9Y5I0 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
PCDHA13Q9Y5I0 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
PCDHA13Q9Y5I0 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
PCDHA13Q9Y5I0 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
PCDHA13Q9Y5I0 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC30.19■■■□□ 2.42
PCDHA13Q9Y5I0 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
PCDHA13Q9Y5I0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
PCDHA13Q9Y5I0 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
PCDHA13Q9Y5I0 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.17■■■□□ 2.42
PCDHA13Q9Y5I0 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
PCDHA13Q9Y5I0 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
PCDHA13Q9Y5I0 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.14■■■□□ 2.42
PCDHA13Q9Y5I0 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.14■■■□□ 2.42
PCDHA13Q9Y5I0 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PCDHA13Q9Y5I0 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.11■■■□□ 2.41
PCDHA13Q9Y5I0 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PCDHA13Q9Y5I0 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PCDHA13Q9Y5I0 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
PCDHA13Q9Y5I0 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
PCDHA13Q9Y5I0 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.07■■■□□ 2.4
PCDHA13Q9Y5I0 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
PCDHA13Q9Y5I0 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.06■■■□□ 2.4
PCDHA13Q9Y5I0 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC30.05■■■□□ 2.4
PCDHA13Q9Y5I0 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
PCDHA13Q9Y5I0 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
PCDHA13Q9Y5I0 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.02■■■□□ 2.4
PCDHA13Q9Y5I0 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
PCDHA13Q9Y5I0 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.01■■■□□ 2.39
PCDHA13Q9Y5I0 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30■■■□□ 2.39
PCDHA13Q9Y5I0 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
PCDHA13Q9Y5I0 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
PCDHA13Q9Y5I0 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC29.98■■■□□ 2.39
PCDHA13Q9Y5I0 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
PCDHA13Q9Y5I0 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
PCDHA13Q9Y5I0 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
PCDHA13Q9Y5I0 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC29.89■■■□□ 2.37
PCDHA13Q9Y5I0 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.88■■■□□ 2.37
PCDHA13Q9Y5I0 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC29.84■■■□□ 2.37
PCDHA13Q9Y5I0 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms