Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC32.63■■■□□ 2.81
PCDHA2Q9Y5H9 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC32.59■■■□□ 2.81
PCDHA2Q9Y5H9 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC32.56■■■□□ 2.8
PCDHA2Q9Y5H9 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC32.55■■■□□ 2.8
PCDHA2Q9Y5H9 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC32.54■■■□□ 2.8
PCDHA2Q9Y5H9 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
PCDHA2Q9Y5H9 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
PCDHA2Q9Y5H9 DYNLL1-208ENST00000550178 581 ntBASIC32.51■■■□□ 2.79
PCDHA2Q9Y5H9 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC32.49■■■□□ 2.79
PCDHA2Q9Y5H9 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC32.48■■■□□ 2.79
PCDHA2Q9Y5H9 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC32.45■■■□□ 2.79
PCDHA2Q9Y5H9 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC32.45■■■□□ 2.78
PCDHA2Q9Y5H9 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC32.44■■■□□ 2.78
PCDHA2Q9Y5H9 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC32.42■■■□□ 2.78
PCDHA2Q9Y5H9 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
PCDHA2Q9Y5H9 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
PCDHA2Q9Y5H9 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
PCDHA2Q9Y5H9 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC32.34■■■□□ 2.77
PCDHA2Q9Y5H9 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC32.34■■■□□ 2.77
PCDHA2Q9Y5H9 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC32.34■■■□□ 2.77
PCDHA2Q9Y5H9 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
PCDHA2Q9Y5H9 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
PCDHA2Q9Y5H9 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
PCDHA2Q9Y5H9 AL031258.1-201ENST00000623562 325 ntBASIC32.29■■■□□ 2.76
PCDHA2Q9Y5H9 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
PCDHA2Q9Y5H9 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC32.23■■■□□ 2.75
PCDHA2Q9Y5H9 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC32.22■■■□□ 2.75
PCDHA2Q9Y5H9 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC32.19■■■□□ 2.74
PCDHA2Q9Y5H9 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
PCDHA2Q9Y5H9 AC145285.7-201ENST00000614819 1539 ntBASIC32.16■■■□□ 2.74
PCDHA2Q9Y5H9 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC32.15■■■□□ 2.74
PCDHA2Q9Y5H9 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
PCDHA2Q9Y5H9 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
PCDHA2Q9Y5H9 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC32.07■■■□□ 2.72
PCDHA2Q9Y5H9 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
PCDHA2Q9Y5H9 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC32.07■■■□□ 2.72
PCDHA2Q9Y5H9 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC32.05■■■□□ 2.72
PCDHA2Q9Y5H9 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC32.03■■■□□ 2.72
PCDHA2Q9Y5H9 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC32■■■□□ 2.71
PCDHA2Q9Y5H9 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC32■■■□□ 2.71
PCDHA2Q9Y5H9 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC32■■■□□ 2.71
PCDHA2Q9Y5H9 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
PCDHA2Q9Y5H9 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
PCDHA2Q9Y5H9 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.71
PCDHA2Q9Y5H9 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
PCDHA2Q9Y5H9 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
PCDHA2Q9Y5H9 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
PCDHA2Q9Y5H9 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.87■■■□□ 2.69
PCDHA2Q9Y5H9 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC31.86■■■□□ 2.69
PCDHA2Q9Y5H9 EBPL-203ENST00000378270 579 ntTSL 2 BASIC31.85■■■□□ 2.69
PCDHA2Q9Y5H9 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
PCDHA2Q9Y5H9 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
PCDHA2Q9Y5H9 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.82■■■□□ 2.68
PCDHA2Q9Y5H9 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
PCDHA2Q9Y5H9 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
PCDHA2Q9Y5H9 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.77■■■□□ 2.68
PCDHA2Q9Y5H9 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
PCDHA2Q9Y5H9 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.74■■■□□ 2.67
PCDHA2Q9Y5H9 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
PCDHA2Q9Y5H9 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC31.73■■■□□ 2.67
PCDHA2Q9Y5H9 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.71■■■□□ 2.67
PCDHA2Q9Y5H9 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
PCDHA2Q9Y5H9 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
PCDHA2Q9Y5H9 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
PCDHA2Q9Y5H9 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
PCDHA2Q9Y5H9 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
PCDHA2Q9Y5H9 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
PCDHA2Q9Y5H9 RARRES2P7-201ENST00000567349 469 ntBASIC31.65■■■□□ 2.66
PCDHA2Q9Y5H9 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.65■■■□□ 2.66
PCDHA2Q9Y5H9 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
PCDHA2Q9Y5H9 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
PCDHA2Q9Y5H9 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
PCDHA2Q9Y5H9 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
PCDHA2Q9Y5H9 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
PCDHA2Q9Y5H9 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.59■■■□□ 2.65
PCDHA2Q9Y5H9 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.58■■■□□ 2.65
PCDHA2Q9Y5H9 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.57■■■□□ 2.64
PCDHA2Q9Y5H9 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
PCDHA2Q9Y5H9 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
PCDHA2Q9Y5H9 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
PCDHA2Q9Y5H9 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.53■■■□□ 2.64
PCDHA2Q9Y5H9 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
PCDHA2Q9Y5H9 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.52■■■□□ 2.64
PCDHA2Q9Y5H9 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
PCDHA2Q9Y5H9 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.51■■■□□ 2.63
PCDHA2Q9Y5H9 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.51■■■□□ 2.63
PCDHA2Q9Y5H9 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.5■■■□□ 2.63
PCDHA2Q9Y5H9 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
PCDHA2Q9Y5H9 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.49■■■□□ 2.63
PCDHA2Q9Y5H9 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.48■■■□□ 2.63
PCDHA2Q9Y5H9 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
PCDHA2Q9Y5H9 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.63
PCDHA2Q9Y5H9 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.45■■■□□ 2.63
PCDHA2Q9Y5H9 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
PCDHA2Q9Y5H9 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.44■■■□□ 2.62
PCDHA2Q9Y5H9 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PCDHA2Q9Y5H9 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.4■■■□□ 2.62
PCDHA2Q9Y5H9 SETD8P1-201ENST00000623146 1180 ntBASIC31.4■■■□□ 2.62
PCDHA2Q9Y5H9 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PCDHA2Q9Y5H9 AC097358.2-201ENST00000607541 1159 ntBASIC31.37■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms