Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC38.21■■■■□ 3.71
TFCP2L1Q9NZI6 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC38.21■■■■□ 3.71
TFCP2L1Q9NZI6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC38.2■■■■□ 3.71
TFCP2L1Q9NZI6 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC38.19■■■■□ 3.7
TFCP2L1Q9NZI6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC38.18■■■■□ 3.7
TFCP2L1Q9NZI6 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC38.17■■■■□ 3.7
TFCP2L1Q9NZI6 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
TFCP2L1Q9NZI6 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC38.11■■■■□ 3.69
TFCP2L1Q9NZI6 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC38.1■■■■□ 3.69
TFCP2L1Q9NZI6 RARRES2P7-201ENST00000567349 469 ntBASIC38.09■■■■□ 3.69
TFCP2L1Q9NZI6 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC38.01■■■■□ 3.68
TFCP2L1Q9NZI6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC37.97■■■■□ 3.67
TFCP2L1Q9NZI6 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC37.9■■■■□ 3.66
TFCP2L1Q9NZI6 AC097358.2-201ENST00000607541 1159 ntBASIC37.87■■■■□ 3.65
TFCP2L1Q9NZI6 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC37.83■■■■□ 3.65
TFCP2L1Q9NZI6 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC37.8■■■■□ 3.64
TFCP2L1Q9NZI6 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC37.79■■■■□ 3.64
TFCP2L1Q9NZI6 RPS2P35-201ENST00000443417 897 ntBASIC37.75■■■■□ 3.63
TFCP2L1Q9NZI6 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC37.71■■■■□ 3.63
TFCP2L1Q9NZI6 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC37.71■■■■□ 3.63
TFCP2L1Q9NZI6 AC136428.2-201ENST00000563187 214 ntBASIC37.69■■■■□ 3.62
TFCP2L1Q9NZI6 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
TFCP2L1Q9NZI6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC37.65■■■■□ 3.62
TFCP2L1Q9NZI6 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC37.65■■■■□ 3.62
TFCP2L1Q9NZI6 SETD8P1-201ENST00000623146 1180 ntBASIC37.63■■■■□ 3.61
TFCP2L1Q9NZI6 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC37.62■■■■□ 3.61
TFCP2L1Q9NZI6 SUZ12P1-203ENST00000578195 985 ntBASIC37.62■■■■□ 3.61
TFCP2L1Q9NZI6 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC37.61■■■■□ 3.61
TFCP2L1Q9NZI6 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC37.6■■■■□ 3.61
TFCP2L1Q9NZI6 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC37.58■■■■□ 3.61
TFCP2L1Q9NZI6 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC37.54■■■■□ 3.6
TFCP2L1Q9NZI6 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC37.53■■■■□ 3.6
TFCP2L1Q9NZI6 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC37.49■■■■□ 3.59
TFCP2L1Q9NZI6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC37.47■■■■□ 3.59
TFCP2L1Q9NZI6 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC37.47■■■■□ 3.59
TFCP2L1Q9NZI6 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC37.46■■■■□ 3.59
TFCP2L1Q9NZI6 EBPL-203ENST00000378270 579 ntTSL 2 BASIC37.45■■■■□ 3.59
TFCP2L1Q9NZI6 KLF16-203ENST00000592313 508 ntTSL 3 BASIC37.44■■■■□ 3.58
TFCP2L1Q9NZI6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
TFCP2L1Q9NZI6 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC37.41■■■■□ 3.58
TFCP2L1Q9NZI6 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC37.4■■■■□ 3.58
TFCP2L1Q9NZI6 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC37.37■■■■□ 3.57
TFCP2L1Q9NZI6 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC37.35■■■■□ 3.57
TFCP2L1Q9NZI6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC37.34■■■■□ 3.57
TFCP2L1Q9NZI6 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC37.33■■■■□ 3.57
TFCP2L1Q9NZI6 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC37.32■■■■□ 3.57
TFCP2L1Q9NZI6 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC37.32■■■■□ 3.56
TFCP2L1Q9NZI6 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC37.31■■■■□ 3.56
TFCP2L1Q9NZI6 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC37.28■■■■□ 3.56
TFCP2L1Q9NZI6 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC37.27■■■■□ 3.56
TFCP2L1Q9NZI6 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC37.2■■■■□ 3.55
TFCP2L1Q9NZI6 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC37.16■■■■□ 3.54
TFCP2L1Q9NZI6 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
TFCP2L1Q9NZI6 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC37.16■■■■□ 3.54
TFCP2L1Q9NZI6 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC37.15■■■■□ 3.54
TFCP2L1Q9NZI6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC37.13■■■■□ 3.53
TFCP2L1Q9NZI6 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC37.11■■■■□ 3.53
TFCP2L1Q9NZI6 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC37.1■■■■□ 3.53
TFCP2L1Q9NZI6 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC37.04■■■■□ 3.52
TFCP2L1Q9NZI6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC37.04■■■■□ 3.52
TFCP2L1Q9NZI6 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC37.03■■■■□ 3.52
TFCP2L1Q9NZI6 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC37.03■■■■□ 3.52
TFCP2L1Q9NZI6 AL162393.1-201ENST00000437852 946 ntBASIC37.01■■■■□ 3.52
TFCP2L1Q9NZI6 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC37.01■■■■□ 3.52
TFCP2L1Q9NZI6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC36.96■■■■□ 3.51
TFCP2L1Q9NZI6 CAHM-201ENST00000604200 896 ntBASIC36.94■■■■□ 3.5
TFCP2L1Q9NZI6 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
TFCP2L1Q9NZI6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC36.91■■■■□ 3.5
TFCP2L1Q9NZI6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC36.91■■■■□ 3.5
TFCP2L1Q9NZI6 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
TFCP2L1Q9NZI6 NRG1-221ENST00000614767 762 ntTSL 5 BASIC36.9■■■■□ 3.5
TFCP2L1Q9NZI6 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC36.89■■■■□ 3.5
TFCP2L1Q9NZI6 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
TFCP2L1Q9NZI6 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC36.87■■■■□ 3.49
TFCP2L1Q9NZI6 AP006261.1-201ENST00000584783 668 ntBASIC36.87■■■■□ 3.49
TFCP2L1Q9NZI6 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC36.84■■■■□ 3.49
TFCP2L1Q9NZI6 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC36.79■■■■□ 3.48
TFCP2L1Q9NZI6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC36.77■■■■□ 3.48
TFCP2L1Q9NZI6 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC36.73■■■■□ 3.47
TFCP2L1Q9NZI6 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC36.72■■■■□ 3.47
TFCP2L1Q9NZI6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC36.72■■■■□ 3.47
TFCP2L1Q9NZI6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC36.72■■■■□ 3.47
TFCP2L1Q9NZI6 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC36.71■■■■□ 3.47
TFCP2L1Q9NZI6 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
TFCP2L1Q9NZI6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
TFCP2L1Q9NZI6 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC36.7■■■■□ 3.47
TFCP2L1Q9NZI6 AL391121.1-201ENST00000607967 1349 ntBASIC36.68■■■■□ 3.46
TFCP2L1Q9NZI6 MIR7108-201ENST00000614319 87 ntBASIC36.68■■■■□ 3.46
TFCP2L1Q9NZI6 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC36.68■■■■□ 3.46
TFCP2L1Q9NZI6 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.46
TFCP2L1Q9NZI6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC36.62■■■■□ 3.45
TFCP2L1Q9NZI6 ABHD17AP4-201ENST00000411545 909 ntBASIC36.62■■■■□ 3.45
TFCP2L1Q9NZI6 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
TFCP2L1Q9NZI6 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC36.59■■■■□ 3.45
TFCP2L1Q9NZI6 MVK-208ENST00000539696 608 ntTSL 5 BASIC36.57■■■■□ 3.44
TFCP2L1Q9NZI6 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC36.57■■■■□ 3.44
TFCP2L1Q9NZI6 HNRNPLP2-201ENST00000568980 1570 ntBASIC36.57■■■■□ 3.44
TFCP2L1Q9NZI6 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC36.52■■■■□ 3.44
TFCP2L1Q9NZI6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC36.51■■■■□ 3.44
TFCP2L1Q9NZI6 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC36.51■■■■□ 3.44
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms