Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC38.21■■■■□ 3.71
TFCP2L1Q9NZI6 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC38.21■■■■□ 3.71
TFCP2L1Q9NZI6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC38.2■■■■□ 3.71
TFCP2L1Q9NZI6 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC38.19■■■■□ 3.7
TFCP2L1Q9NZI6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC38.18■■■■□ 3.7
TFCP2L1Q9NZI6 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC38.17■■■■□ 3.7
TFCP2L1Q9NZI6 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
TFCP2L1Q9NZI6 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC38.11■■■■□ 3.69
TFCP2L1Q9NZI6 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC38.1■■■■□ 3.69
TFCP2L1Q9NZI6 RARRES2P7-201ENST00000567349 469 ntBASIC38.09■■■■□ 3.69
TFCP2L1Q9NZI6 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC38.01■■■■□ 3.68
TFCP2L1Q9NZI6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC37.97■■■■□ 3.67
TFCP2L1Q9NZI6 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC37.9■■■■□ 3.66
TFCP2L1Q9NZI6 AC097358.2-201ENST00000607541 1159 ntBASIC37.87■■■■□ 3.65
TFCP2L1Q9NZI6 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC37.83■■■■□ 3.65
TFCP2L1Q9NZI6 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC37.8■■■■□ 3.64
TFCP2L1Q9NZI6 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC37.79■■■■□ 3.64
TFCP2L1Q9NZI6 RPS2P35-201ENST00000443417 897 ntBASIC37.75■■■■□ 3.63
TFCP2L1Q9NZI6 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC37.71■■■■□ 3.63
TFCP2L1Q9NZI6 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC37.71■■■■□ 3.63
TFCP2L1Q9NZI6 AC136428.2-201ENST00000563187 214 ntBASIC37.69■■■■□ 3.62
TFCP2L1Q9NZI6 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
TFCP2L1Q9NZI6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC37.65■■■■□ 3.62
TFCP2L1Q9NZI6 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC37.65■■■■□ 3.62
TFCP2L1Q9NZI6 SETD8P1-201ENST00000623146 1180 ntBASIC37.63■■■■□ 3.61
TFCP2L1Q9NZI6 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC37.62■■■■□ 3.61
TFCP2L1Q9NZI6 SUZ12P1-203ENST00000578195 985 ntBASIC37.62■■■■□ 3.61
TFCP2L1Q9NZI6 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC37.61■■■■□ 3.61
TFCP2L1Q9NZI6 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC37.6■■■■□ 3.61
TFCP2L1Q9NZI6 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC37.58■■■■□ 3.61
TFCP2L1Q9NZI6 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC37.54■■■■□ 3.6
TFCP2L1Q9NZI6 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC37.53■■■■□ 3.6
TFCP2L1Q9NZI6 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC37.49■■■■□ 3.59
TFCP2L1Q9NZI6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC37.47■■■■□ 3.59
TFCP2L1Q9NZI6 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC37.47■■■■□ 3.59
TFCP2L1Q9NZI6 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC37.46■■■■□ 3.59
TFCP2L1Q9NZI6 EBPL-203ENST00000378270 579 ntTSL 2 BASIC37.45■■■■□ 3.59
TFCP2L1Q9NZI6 KLF16-203ENST00000592313 508 ntTSL 3 BASIC37.44■■■■□ 3.58
TFCP2L1Q9NZI6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
TFCP2L1Q9NZI6 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC37.41■■■■□ 3.58
TFCP2L1Q9NZI6 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC37.4■■■■□ 3.58
TFCP2L1Q9NZI6 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC37.37■■■■□ 3.57
TFCP2L1Q9NZI6 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC37.35■■■■□ 3.57
TFCP2L1Q9NZI6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC37.34■■■■□ 3.57
TFCP2L1Q9NZI6 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC37.33■■■■□ 3.57
TFCP2L1Q9NZI6 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC37.32■■■■□ 3.57
TFCP2L1Q9NZI6 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC37.32■■■■□ 3.56
TFCP2L1Q9NZI6 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC37.31■■■■□ 3.56
TFCP2L1Q9NZI6 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC37.28■■■■□ 3.56
TFCP2L1Q9NZI6 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC37.27■■■■□ 3.56
TFCP2L1Q9NZI6 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC37.2■■■■□ 3.55
TFCP2L1Q9NZI6 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC37.16■■■■□ 3.54
TFCP2L1Q9NZI6 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
TFCP2L1Q9NZI6 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC37.16■■■■□ 3.54
TFCP2L1Q9NZI6 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC37.15■■■■□ 3.54
TFCP2L1Q9NZI6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC37.13■■■■□ 3.53
TFCP2L1Q9NZI6 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC37.11■■■■□ 3.53
TFCP2L1Q9NZI6 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC37.1■■■■□ 3.53
TFCP2L1Q9NZI6 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC37.04■■■■□ 3.52
TFCP2L1Q9NZI6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC37.04■■■■□ 3.52
TFCP2L1Q9NZI6 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC37.03■■■■□ 3.52
TFCP2L1Q9NZI6 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC37.03■■■■□ 3.52
TFCP2L1Q9NZI6 AL162393.1-201ENST00000437852 946 ntBASIC37.01■■■■□ 3.52
TFCP2L1Q9NZI6 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC37.01■■■■□ 3.52
TFCP2L1Q9NZI6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC36.96■■■■□ 3.51
TFCP2L1Q9NZI6 CAHM-201ENST00000604200 896 ntBASIC36.94■■■■□ 3.5
TFCP2L1Q9NZI6 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
TFCP2L1Q9NZI6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC36.91■■■■□ 3.5
TFCP2L1Q9NZI6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC36.91■■■■□ 3.5
TFCP2L1Q9NZI6 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
TFCP2L1Q9NZI6 NRG1-221ENST00000614767 762 ntTSL 5 BASIC36.9■■■■□ 3.5
TFCP2L1Q9NZI6 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC36.89■■■■□ 3.5
TFCP2L1Q9NZI6 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
TFCP2L1Q9NZI6 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC36.87■■■■□ 3.49
TFCP2L1Q9NZI6 AP006261.1-201ENST00000584783 668 ntBASIC36.87■■■■□ 3.49
TFCP2L1Q9NZI6 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC36.84■■■■□ 3.49
TFCP2L1Q9NZI6 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC36.79■■■■□ 3.48
TFCP2L1Q9NZI6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC36.77■■■■□ 3.48
TFCP2L1Q9NZI6 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC36.73■■■■□ 3.47
TFCP2L1Q9NZI6 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC36.72■■■■□ 3.47
TFCP2L1Q9NZI6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC36.72■■■■□ 3.47
TFCP2L1Q9NZI6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC36.72■■■■□ 3.47
TFCP2L1Q9NZI6 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC36.71■■■■□ 3.47
TFCP2L1Q9NZI6 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
TFCP2L1Q9NZI6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
TFCP2L1Q9NZI6 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC36.7■■■■□ 3.47
TFCP2L1Q9NZI6 AL391121.1-201ENST00000607967 1349 ntBASIC36.68■■■■□ 3.46
TFCP2L1Q9NZI6 MIR7108-201ENST00000614319 87 ntBASIC36.68■■■■□ 3.46
TFCP2L1Q9NZI6 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC36.68■■■■□ 3.46
TFCP2L1Q9NZI6 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.46
TFCP2L1Q9NZI6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC36.62■■■■□ 3.45
TFCP2L1Q9NZI6 ABHD17AP4-201ENST00000411545 909 ntBASIC36.62■■■■□ 3.45
TFCP2L1Q9NZI6 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
TFCP2L1Q9NZI6 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC36.59■■■■□ 3.45
TFCP2L1Q9NZI6 MVK-208ENST00000539696 608 ntTSL 5 BASIC36.57■■■■□ 3.44
TFCP2L1Q9NZI6 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC36.57■■■■□ 3.44
TFCP2L1Q9NZI6 HNRNPLP2-201ENST00000568980 1570 ntBASIC36.57■■■■□ 3.44
TFCP2L1Q9NZI6 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC36.52■■■■□ 3.44
TFCP2L1Q9NZI6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC36.51■■■■□ 3.44
TFCP2L1Q9NZI6 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC36.51■■■■□ 3.44
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms