Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CYSTM1Q9H1C7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CYSTM1Q9H1C7 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC17.5■□□□□ 0.39
CYSTM1Q9H1C7 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CYSTM1Q9H1C7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CYSTM1Q9H1C7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CYSTM1Q9H1C7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CYSTM1Q9H1C7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CYSTM1Q9H1C7 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC17.45■□□□□ 0.38
CYSTM1Q9H1C7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC17.44■□□□□ 0.38
CYSTM1Q9H1C7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CYSTM1Q9H1C7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC17.43■□□□□ 0.38
CYSTM1Q9H1C7 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CYSTM1Q9H1C7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CYSTM1Q9H1C7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CYSTM1Q9H1C7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CYSTM1Q9H1C7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC17.38■□□□□ 0.37
CYSTM1Q9H1C7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC17.37■□□□□ 0.37
CYSTM1Q9H1C7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CYSTM1Q9H1C7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYSTM1Q9H1C7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CYSTM1Q9H1C7 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CYSTM1Q9H1C7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CYSTM1Q9H1C7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CYSTM1Q9H1C7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC17.29■□□□□ 0.36
CYSTM1Q9H1C7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CYSTM1Q9H1C7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CYSTM1Q9H1C7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC17.27■□□□□ 0.35
CYSTM1Q9H1C7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CYSTM1Q9H1C7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CYSTM1Q9H1C7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CYSTM1Q9H1C7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CYSTM1Q9H1C7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CYSTM1Q9H1C7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC17.25■□□□□ 0.35
CYSTM1Q9H1C7 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
CYSTM1Q9H1C7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CYSTM1Q9H1C7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CYSTM1Q9H1C7 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CYSTM1Q9H1C7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CYSTM1Q9H1C7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CYSTM1Q9H1C7 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CYSTM1Q9H1C7 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CYSTM1Q9H1C7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CYSTM1Q9H1C7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CYSTM1Q9H1C7 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC17.18■□□□□ 0.34
CYSTM1Q9H1C7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CYSTM1Q9H1C7 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CYSTM1Q9H1C7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CYSTM1Q9H1C7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CYSTM1Q9H1C7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CYSTM1Q9H1C7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
CYSTM1Q9H1C7 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CYSTM1Q9H1C7 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CYSTM1Q9H1C7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CYSTM1Q9H1C7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CYSTM1Q9H1C7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CYSTM1Q9H1C7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CYSTM1Q9H1C7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CYSTM1Q9H1C7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CYSTM1Q9H1C7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.11■□□□□ 0.33
CYSTM1Q9H1C7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CYSTM1Q9H1C7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CYSTM1Q9H1C7 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CYSTM1Q9H1C7 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC17.07■□□□□ 0.32
CYSTM1Q9H1C7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CYSTM1Q9H1C7 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC17.04■□□□□ 0.32
CYSTM1Q9H1C7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CYSTM1Q9H1C7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CYSTM1Q9H1C7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC17.03■□□□□ 0.32
CYSTM1Q9H1C7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CYSTM1Q9H1C7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CYSTM1Q9H1C7 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CYSTM1Q9H1C7 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CYSTM1Q9H1C7 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CYSTM1Q9H1C7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC16.98■□□□□ 0.31
CYSTM1Q9H1C7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CYSTM1Q9H1C7 ABCB10P3-201ENST00000561950 2166 ntBASIC16.97■□□□□ 0.31
CYSTM1Q9H1C7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CYSTM1Q9H1C7 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CYSTM1Q9H1C7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CYSTM1Q9H1C7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CYSTM1Q9H1C7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CYSTM1Q9H1C7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CYSTM1Q9H1C7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CYSTM1Q9H1C7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CYSTM1Q9H1C7 ABCB10P1-201ENST00000614297 2181 ntBASIC16.88■□□□□ 0.29
CYSTM1Q9H1C7 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CYSTM1Q9H1C7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CYSTM1Q9H1C7 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CYSTM1Q9H1C7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CYSTM1Q9H1C7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CYSTM1Q9H1C7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CYSTM1Q9H1C7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CYSTM1Q9H1C7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CYSTM1Q9H1C7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CYSTM1Q9H1C7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
CYSTM1Q9H1C7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CYSTM1Q9H1C7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CYSTM1Q9H1C7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CYSTM1Q9H1C7 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms