Protein–RNA interactions for Protein: Q99325

ATG40, Autophagy-related protein 40, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG40Q99325 YBR220CYBR220C 1683 nt10.38□□□□□ -0.75
ATG40Q99325 NPL3YDR432W 1245 nt10.36□□□□□ -0.75
ATG40Q99325 YCH1YGR203W 447 nt10.36□□□□□ -0.75
ATG40Q99325 PET9YBL030C 957 nt10.36□□□□□ -0.75
ATG40Q99325 ART5YGR068C 1761 nt10.35□□□□□ -0.75
ATG40Q99325 YOR139CYOR139C 393 nt10.35□□□□□ -0.75
ATG40Q99325 GFD2YCL036W 1701 nt10.35□□□□□ -0.75
ATG40Q99325 SDH1YKL148C 1923 nt10.35□□□□□ -0.75
ATG40Q99325 TAT1YBR069C 1860 nt10.34□□□□□ -0.75
ATG40Q99325 IRC15YPL017C 1500 nt10.32□□□□□ -0.76
ATG40Q99325 TIR4YOR009W 1464 nt10.28□□□□□ -0.76
ATG40Q99325 YLR154C-GYLR154C-G 150 nt10.27□□□□□ -0.77
ATG40Q99325 SCC4YER147C 1875 nt10.27□□□□□ -0.77
ATG40Q99325 YJL225CYJL225C 5277 nt10.26□□□□□ -0.77
ATG40Q99325 GIS3YLR094C 1509 nt10.25□□□□□ -0.77
ATG40Q99325 PAC11YDR488C 1602 nt10.23□□□□□ -0.77
ATG40Q99325 RTS2YOR077W 699 nt10.21□□□□□ -0.77
ATG40Q99325 YJL152WYJL152W 360 nt10.19□□□□□ -0.78
ATG40Q99325 YLR281CYLR281C 468 nt10.18□□□□□ -0.78
ATG40Q99325 YMR057CYMR057C 372 nt10.18□□□□□ -0.78
ATG40Q99325 CUE1YMR264W 612 nt10.18□□□□□ -0.78
ATG40Q99325 WHI5YOR083W 888 nt10.17□□□□□ -0.78
ATG40Q99325 SEC11YIR022W 504 nt10.11□□□□□ -0.79
ATG40Q99325 YCL048W-AYCL048W-A 240 nt10.1□□□□□ -0.79
ATG40Q99325 FPS1YLL043W 2010 nt10.09□□□□□ -0.79
ATG40Q99325 YIL100WYIL100W 354 nt10.08□□□□□ -0.8
ATG40Q99325 YLR236CYLR236C 324 nt10.07□□□□□ -0.8
ATG40Q99325 RDN37-1RDN37-1 5354 nt10.07□□□□□ -0.8
ATG40Q99325 RDN37-2RDN37-2 5354 nt10.07□□□□□ -0.8
ATG40Q99325 NVJ2YPR091C 2313 nt10.06□□□□□ -0.8
ATG40Q99325 IMP2'YIL154C 1041 nt10.03□□□□□ -0.8
ATG40Q99325 IDH1YNL037C 1083 nt10.02□□□□□ -0.81
ATG40Q99325 YNL195CYNL195C 786 nt10.01□□□□□ -0.81
ATG40Q99325 PCH2YBR186W 1695 nt10.01□□□□□ -0.81
ATG40Q99325 YSC84YHR016C 1407 nt10□□□□□ -0.81
ATG40Q99325 PUS2YGL063W 1113 nt10□□□□□ -0.81
ATG40Q99325 tM(CAU)CtM(CAU)C 72 nt9.98□□□□□ -0.81
ATG40Q99325 IMT4tM(CAU)E 72 nt9.98□□□□□ -0.81
ATG40Q99325 IMT3tM(CAU)J3 72 nt9.98□□□□□ -0.81
ATG40Q99325 IMT1tM(CAU)O1 72 nt9.98□□□□□ -0.81
ATG40Q99325 IMT2tM(CAU)P 72 nt9.98□□□□□ -0.81
ATG40Q99325 DSK2YMR276W 1122 nt9.96□□□□□ -0.82
ATG40Q99325 GUT2YIL155C 1950 nt9.95□□□□□ -0.82
ATG40Q99325 YHL050CYHL050C 2094 nt9.94□□□□□ -0.82
ATG40Q99325 GBP2YCL011C 1284 nt9.92□□□□□ -0.82
ATG40Q99325 RRT12YCR045C 1476 nt9.91□□□□□ -0.82
ATG40Q99325 TCD2YKL027W 1344 nt9.86□□□□□ -0.83
ATG40Q99325 RRD1YIL153W 1182 nt9.85□□□□□ -0.83
ATG40Q99325 FMP52YER004W 696 nt9.84□□□□□ -0.83
ATG40Q99325 YDR433WYDR433W 441 nt9.8□□□□□ -0.84
ATG40Q99325 YPR011CYPR011C 981 nt9.8□□□□□ -0.84
ATG40Q99325 RTF1YGL244W 1677 nt9.78□□□□□ -0.84
ATG40Q99325 DED1YOR204W 1815 nt9.78□□□□□ -0.84
ATG40Q99325 BOP3YNL042W 1191 nt9.78□□□□□ -0.84
ATG40Q99325 FMP45YDL222C 930 nt9.77□□□□□ -0.85
ATG40Q99325 ERV46YAL042W 1248 nt9.77□□□□□ -0.85
ATG40Q99325 PIB2YGL023C 1908 nt9.76□□□□□ -0.85
ATG40Q99325 YKR040CYKR040C 504 nt9.71□□□□□ -0.86
ATG40Q99325 LPX1YOR084W 1164 nt9.7□□□□□ -0.86
ATG40Q99325 MXR2YCL033C 507 nt9.7□□□□□ -0.86
ATG40Q99325 FMT1YBL013W 1206 nt9.69□□□□□ -0.86
ATG40Q99325 PCM1YEL058W 1674 nt9.68□□□□□ -0.86
ATG40Q99325 SOR2YDL246C 1074 nt9.68□□□□□ -0.86
ATG40Q99325 SOR1YJR159W 1074 nt9.68□□□□□ -0.86
ATG40Q99325 NCP1YHR042W 2076 nt9.67□□□□□ -0.86
ATG40Q99325 YCL042WYCL042W 360 nt9.66□□□□□ -0.86
ATG40Q99325 CWP1YKL096W 720 nt9.64□□□□□ -0.87
ATG40Q99325 SNF6YHL025W 999 nt9.63□□□□□ -0.87
ATG40Q99325 LCB1YMR296C 1677 nt9.63□□□□□ -0.87
ATG40Q99325 ADH2YMR303C 1047 nt9.62□□□□□ -0.87
ATG40Q99325 SIM1YIL123W 1431 nt9.6□□□□□ -0.87
ATG40Q99325 PTK1YKL198C 1989 nt9.6□□□□□ -0.87
ATG40Q99325 FRD1YEL047C 1413 nt9.59□□□□□ -0.87
ATG40Q99325 BIO4YNR057C 714 nt9.54□□□□□ -0.88
ATG40Q99325 YIH1YCR059C 777 nt9.52□□□□□ -0.89
ATG40Q99325 MOT3YMR070W 1473 nt9.51□□□□□ -0.89
ATG40Q99325 RNQ1YCL028W 1218 nt9.5□□□□□ -0.89
ATG40Q99325 ERF2YLR246W 1080 nt9.46□□□□□ -0.9
ATG40Q99325 YFL054CYFL054C 1941 nt9.44□□□□□ -0.9
ATG40Q99325 LYS4YDR234W 2082 nt9.43□□□□□ -0.9
ATG40Q99325 YLL053CYLL053C 459 nt9.43□□□□□ -0.9
ATG40Q99325 DIC1YLR348C 897 nt9.43□□□□□ -0.9
ATG40Q99325 CRR1YLR213C 1269 nt9.42□□□□□ -0.9
ATG40Q99325 YLR235CYLR235C 399 nt9.41□□□□□ -0.9
ATG40Q99325 SPP1YPL138C 1062 nt9.4□□□□□ -0.9
ATG40Q99325 BOR1YNL275W 1731 nt9.39□□□□□ -0.91
ATG40Q99325 FTR1YER145C 1215 nt9.37□□□□□ -0.91
ATG40Q99325 SPT8YLR055C 1809 nt9.37□□□□□ -0.91
ATG40Q99325 YFL067WYFL067W 528 nt9.36□□□□□ -0.91
ATG40Q99325 AQY1YPR192W 918 nt9.35□□□□□ -0.91
ATG40Q99325 PTH1YHR189W 573 nt9.34□□□□□ -0.91
ATG40Q99325 GAL1YBR020W 1587 nt9.33□□□□□ -0.92
ATG40Q99325 ATF2YGR177C 1608 nt9.32□□□□□ -0.92
ATG40Q99325 HEM12YDR047W 1089 nt9.31□□□□□ -0.92
ATG40Q99325 TIM23YNR017W 669 nt9.31□□□□□ -0.92
ATG40Q99325 UME6YDR207C 2511 nt9.31□□□□□ -0.92
ATG40Q99325 TRM5YHR070W 1500 nt9.3□□□□□ -0.92
ATG40Q99325 YKL030WYKL030W 606 nt9.29□□□□□ -0.92
ATG40Q99325 DDR2YOL052C-A 186 nt9.29□□□□□ -0.92
ATG40Q99325 YHR056W-AYHR056W-A 435 nt9.28□□□□□ -0.92
Retrieved 100 of 7,029 protein–RNA pairs in 7.1 ms