Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
COL21A1Q96P44 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
COL21A1Q96P44 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
COL21A1Q96P44 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.93■■□□□ 1.9
COL21A1Q96P44 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
COL21A1Q96P44 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
COL21A1Q96P44 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
COL21A1Q96P44 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
COL21A1Q96P44 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
COL21A1Q96P44 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
COL21A1Q96P44 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
COL21A1Q96P44 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
COL21A1Q96P44 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.86■■□□□ 1.89
COL21A1Q96P44 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC26.84■■□□□ 1.89
COL21A1Q96P44 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
COL21A1Q96P44 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
COL21A1Q96P44 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
COL21A1Q96P44 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
COL21A1Q96P44 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
COL21A1Q96P44 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
COL21A1Q96P44 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
COL21A1Q96P44 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
COL21A1Q96P44 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
COL21A1Q96P44 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC26.7■■□□□ 1.86
COL21A1Q96P44 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC26.7■■□□□ 1.86
COL21A1Q96P44 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
COL21A1Q96P44 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
COL21A1Q96P44 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC26.68■■□□□ 1.86
COL21A1Q96P44 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
COL21A1Q96P44 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
COL21A1Q96P44 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
COL21A1Q96P44 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL21A1Q96P44 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
COL21A1Q96P44 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.57■■□□□ 1.84
COL21A1Q96P44 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
COL21A1Q96P44 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
COL21A1Q96P44 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
COL21A1Q96P44 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC26.55■■□□□ 1.84
COL21A1Q96P44 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL21A1Q96P44 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL21A1Q96P44 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL21A1Q96P44 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
COL21A1Q96P44 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.52■■□□□ 1.84
COL21A1Q96P44 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.52■■□□□ 1.84
COL21A1Q96P44 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
COL21A1Q96P44 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC26.51■■□□□ 1.83
COL21A1Q96P44 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
COL21A1Q96P44 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
COL21A1Q96P44 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
COL21A1Q96P44 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.49■■□□□ 1.83
COL21A1Q96P44 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC26.46■■□□□ 1.83
COL21A1Q96P44 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.45■■□□□ 1.82
COL21A1Q96P44 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
COL21A1Q96P44 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
COL21A1Q96P44 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.42■■□□□ 1.82
COL21A1Q96P44 AP002365.1-201ENST00000603448 772 ntBASIC26.42■■□□□ 1.82
COL21A1Q96P44 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL21A1Q96P44 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL21A1Q96P44 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL21A1Q96P44 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL21A1Q96P44 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
COL21A1Q96P44 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
COL21A1Q96P44 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.39■■□□□ 1.82
COL21A1Q96P44 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
COL21A1Q96P44 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL21A1Q96P44 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.37■■□□□ 1.81
COL21A1Q96P44 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.36■■□□□ 1.81
COL21A1Q96P44 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
COL21A1Q96P44 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
COL21A1Q96P44 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC26.32■■□□□ 1.8
COL21A1Q96P44 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL21A1Q96P44 DYNLL1-208ENST00000550178 581 ntBASIC26.32■■□□□ 1.8
COL21A1Q96P44 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL21A1Q96P44 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL21A1Q96P44 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC26.31■■□□□ 1.8
COL21A1Q96P44 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC26.31■■□□□ 1.8
COL21A1Q96P44 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL21A1Q96P44 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL21A1Q96P44 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL21A1Q96P44 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL21A1Q96P44 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.28■■□□□ 1.8
COL21A1Q96P44 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL21A1Q96P44 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL21A1Q96P44 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC26.25■■□□□ 1.79
COL21A1Q96P44 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL21A1Q96P44 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL21A1Q96P44 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL21A1Q96P44 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
COL21A1Q96P44 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.22■■□□□ 1.79
COL21A1Q96P44 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
COL21A1Q96P44 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
COL21A1Q96P44 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
COL21A1Q96P44 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
COL21A1Q96P44 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.19■■□□□ 1.78
COL21A1Q96P44 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL21A1Q96P44 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL21A1Q96P44 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.16■■□□□ 1.78
COL21A1Q96P44 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
COL21A1Q96P44 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL21A1Q96P44 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms