Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CLDN23Q96B33 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.03■■■□□ 2.4
CLDN23Q96B33 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC30.01■■■□□ 2.39
CLDN23Q96B33 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
CLDN23Q96B33 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC30■■■□□ 2.39
CLDN23Q96B33 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30■■■□□ 2.39
CLDN23Q96B33 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CLDN23Q96B33 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC29.98■■■□□ 2.39
CLDN23Q96B33 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
CLDN23Q96B33 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC29.95■■■□□ 2.39
CLDN23Q96B33 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC29.91■■■□□ 2.38
CLDN23Q96B33 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC29.91■■■□□ 2.38
CLDN23Q96B33 RARRES2P7-201ENST00000567349 469 ntBASIC29.9■■■□□ 2.38
CLDN23Q96B33 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
CLDN23Q96B33 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC29.89■■■□□ 2.37
CLDN23Q96B33 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC29.87■■■□□ 2.37
CLDN23Q96B33 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC29.86■■■□□ 2.37
CLDN23Q96B33 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC29.86■■■□□ 2.37
CLDN23Q96B33 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC29.82■■■□□ 2.36
CLDN23Q96B33 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CLDN23Q96B33 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CLDN23Q96B33 AC097358.2-201ENST00000607541 1159 ntBASIC29.71■■■□□ 2.35
CLDN23Q96B33 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC29.69■■■□□ 2.34
CLDN23Q96B33 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC29.67■■■□□ 2.34
CLDN23Q96B33 EBPL-203ENST00000378270 579 ntTSL 2 BASIC29.66■■■□□ 2.34
CLDN23Q96B33 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CLDN23Q96B33 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC29.65■■■□□ 2.34
CLDN23Q96B33 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.34
CLDN23Q96B33 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.63■■■□□ 2.33
CLDN23Q96B33 AC136428.2-201ENST00000563187 214 ntBASIC29.63■■■□□ 2.33
CLDN23Q96B33 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
CLDN23Q96B33 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC29.61■■■□□ 2.33
CLDN23Q96B33 SETD8P1-201ENST00000623146 1180 ntBASIC29.58■■■□□ 2.33
CLDN23Q96B33 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CLDN23Q96B33 SUZ12P1-203ENST00000578195 985 ntBASIC29.54■■■□□ 2.32
CLDN23Q96B33 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CLDN23Q96B33 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC29.5■■■□□ 2.31
CLDN23Q96B33 KLF16-203ENST00000592313 508 ntTSL 3 BASIC29.5■■■□□ 2.31
CLDN23Q96B33 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CLDN23Q96B33 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CLDN23Q96B33 RPS2P35-201ENST00000443417 897 ntBASIC29.47■■■□□ 2.31
CLDN23Q96B33 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC29.47■■■□□ 2.31
CLDN23Q96B33 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC29.47■■■□□ 2.31
CLDN23Q96B33 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.45■■■□□ 2.31
CLDN23Q96B33 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC29.45■■■□□ 2.31
CLDN23Q96B33 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC29.41■■■□□ 2.3
CLDN23Q96B33 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CLDN23Q96B33 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC29.38■■■□□ 2.29
CLDN23Q96B33 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CLDN23Q96B33 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CLDN23Q96B33 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CLDN23Q96B33 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
CLDN23Q96B33 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CLDN23Q96B33 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CLDN23Q96B33 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC29.33■■■□□ 2.29
CLDN23Q96B33 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC29.33■■■□□ 2.29
CLDN23Q96B33 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CLDN23Q96B33 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC29.31■■■□□ 2.28
CLDN23Q96B33 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC29.3■■■□□ 2.28
CLDN23Q96B33 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC29.27■■■□□ 2.28
CLDN23Q96B33 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
CLDN23Q96B33 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC29.16■■■□□ 2.26
CLDN23Q96B33 ILK-212ENST00000532063 1617 ntTSL 2 BASIC29.15■■■□□ 2.26
CLDN23Q96B33 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC29.12■■■□□ 2.25
CLDN23Q96B33 CAHM-201ENST00000604200 896 ntBASIC29.1■■■□□ 2.25
CLDN23Q96B33 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CLDN23Q96B33 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CLDN23Q96B33 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.09■■■□□ 2.25
CLDN23Q96B33 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CLDN23Q96B33 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CLDN23Q96B33 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC29.06■■■□□ 2.24
CLDN23Q96B33 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CLDN23Q96B33 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
CLDN23Q96B33 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC29.04■■■□□ 2.24
CLDN23Q96B33 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC29.03■■■□□ 2.24
CLDN23Q96B33 AL162393.1-201ENST00000437852 946 ntBASIC29.02■■■□□ 2.24
CLDN23Q96B33 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC29■■■□□ 2.23
CLDN23Q96B33 MVK-208ENST00000539696 608 ntTSL 5 BASIC29■■■□□ 2.23
CLDN23Q96B33 AP006261.1-201ENST00000584783 668 ntBASIC29■■■□□ 2.23
CLDN23Q96B33 NRG1-221ENST00000614767 762 ntTSL 5 BASIC28.99■■■□□ 2.23
CLDN23Q96B33 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC28.98■■■□□ 2.23
CLDN23Q96B33 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
CLDN23Q96B33 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC28.95■■■□□ 2.22
CLDN23Q96B33 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC28.95■■■□□ 2.22
CLDN23Q96B33 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
CLDN23Q96B33 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
CLDN23Q96B33 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
CLDN23Q96B33 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC28.92■■■□□ 2.22
CLDN23Q96B33 AL391121.1-201ENST00000607967 1349 ntBASIC28.92■■■□□ 2.22
CLDN23Q96B33 AC145285.7-201ENST00000614819 1539 ntBASIC28.91■■■□□ 2.22
CLDN23Q96B33 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CLDN23Q96B33 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
CLDN23Q96B33 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC28.85■■■□□ 2.21
CLDN23Q96B33 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
CLDN23Q96B33 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
CLDN23Q96B33 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC28.84■■■□□ 2.21
CLDN23Q96B33 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CLDN23Q96B33 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CLDN23Q96B33 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CLDN23Q96B33 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms