Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CDRT4Q8N9R6 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CDRT4Q8N9R6 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CDRT4Q8N9R6 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC26.69■■□□□ 1.86
CDRT4Q8N9R6 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CDRT4Q8N9R6 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CDRT4Q8N9R6 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
CDRT4Q8N9R6 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CDRT4Q8N9R6 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
CDRT4Q8N9R6 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.59■■□□□ 1.85
CDRT4Q8N9R6 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CDRT4Q8N9R6 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.58■■□□□ 1.85
CDRT4Q8N9R6 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CDRT4Q8N9R6 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CDRT4Q8N9R6 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CDRT4Q8N9R6 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CDRT4Q8N9R6 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CDRT4Q8N9R6 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
CDRT4Q8N9R6 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
CDRT4Q8N9R6 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC26.54■■□□□ 1.84
CDRT4Q8N9R6 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC26.54■■□□□ 1.84
CDRT4Q8N9R6 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CDRT4Q8N9R6 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
CDRT4Q8N9R6 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CDRT4Q8N9R6 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CDRT4Q8N9R6 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CDRT4Q8N9R6 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CDRT4Q8N9R6 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CDRT4Q8N9R6 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC26.44■■□□□ 1.82
CDRT4Q8N9R6 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
CDRT4Q8N9R6 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.42■■□□□ 1.82
CDRT4Q8N9R6 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CDRT4Q8N9R6 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CDRT4Q8N9R6 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC26.4■■□□□ 1.82
CDRT4Q8N9R6 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.4■■□□□ 1.82
CDRT4Q8N9R6 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CDRT4Q8N9R6 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
CDRT4Q8N9R6 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC26.38■■□□□ 1.81
CDRT4Q8N9R6 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CDRT4Q8N9R6 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CDRT4Q8N9R6 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC26.37■■□□□ 1.81
CDRT4Q8N9R6 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CDRT4Q8N9R6 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDRT4Q8N9R6 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDRT4Q8N9R6 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDRT4Q8N9R6 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDRT4Q8N9R6 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDRT4Q8N9R6 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CDRT4Q8N9R6 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CDRT4Q8N9R6 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CDRT4Q8N9R6 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
CDRT4Q8N9R6 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CDRT4Q8N9R6 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
CDRT4Q8N9R6 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CDRT4Q8N9R6 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
CDRT4Q8N9R6 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CDRT4Q8N9R6 DYNLL1-208ENST00000550178 581 ntBASIC26.18■■□□□ 1.78
CDRT4Q8N9R6 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CDRT4Q8N9R6 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.17■■□□□ 1.78
CDRT4Q8N9R6 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.16■■□□□ 1.78
CDRT4Q8N9R6 AP002365.1-201ENST00000603448 772 ntBASIC26.15■■□□□ 1.78
CDRT4Q8N9R6 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CDRT4Q8N9R6 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.13■■□□□ 1.77
CDRT4Q8N9R6 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.13■■□□□ 1.77
CDRT4Q8N9R6 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CDRT4Q8N9R6 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.12■■□□□ 1.77
CDRT4Q8N9R6 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
CDRT4Q8N9R6 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.11■■□□□ 1.77
CDRT4Q8N9R6 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CDRT4Q8N9R6 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
CDRT4Q8N9R6 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CDRT4Q8N9R6 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CDRT4Q8N9R6 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CDRT4Q8N9R6 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC26.08■■□□□ 1.77
CDRT4Q8N9R6 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.07■■□□□ 1.76
CDRT4Q8N9R6 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC26.07■■□□□ 1.76
CDRT4Q8N9R6 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
CDRT4Q8N9R6 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
CDRT4Q8N9R6 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC26.06■■□□□ 1.76
CDRT4Q8N9R6 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC26.06■■□□□ 1.76
CDRT4Q8N9R6 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CDRT4Q8N9R6 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
CDRT4Q8N9R6 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CDRT4Q8N9R6 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
CDRT4Q8N9R6 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CDRT4Q8N9R6 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26■■□□□ 1.75
CDRT4Q8N9R6 AL031258.1-201ENST00000623562 325 ntBASIC26■■□□□ 1.75
CDRT4Q8N9R6 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26■■□□□ 1.75
CDRT4Q8N9R6 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC25.99■■□□□ 1.75
CDRT4Q8N9R6 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CDRT4Q8N9R6 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC25.98■■□□□ 1.75
CDRT4Q8N9R6 EBPL-203ENST00000378270 579 ntTSL 2 BASIC25.98■■□□□ 1.75
CDRT4Q8N9R6 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CDRT4Q8N9R6 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC25.96■■□□□ 1.75
CDRT4Q8N9R6 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC25.96■■□□□ 1.75
CDRT4Q8N9R6 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CDRT4Q8N9R6 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
CDRT4Q8N9R6 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC25.92■■□□□ 1.74
CDRT4Q8N9R6 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
CDRT4Q8N9R6 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms