Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
CPSF7Q8N684 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CPSF7Q8N684 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.12■■■□□ 2.09
CPSF7Q8N684 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC28.09■■■□□ 2.09
CPSF7Q8N684 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC28.07■■■□□ 2.08
CPSF7Q8N684 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
CPSF7Q8N684 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
CPSF7Q8N684 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
CPSF7Q8N684 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CPSF7Q8N684 AC145285.7-201ENST00000614819 1539 ntBASIC28.04■■■□□ 2.08
CPSF7Q8N684 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28.03■■■□□ 2.08
CPSF7Q8N684 ST7-207ENST00000393449 2127 ntTSL 5 BASIC28.03■■■□□ 2.08
CPSF7Q8N684 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC28.03■■■□□ 2.08
CPSF7Q8N684 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CPSF7Q8N684 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CPSF7Q8N684 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
CPSF7Q8N684 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.92■■■□□ 2.06
CPSF7Q8N684 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC27.92■■■□□ 2.06
CPSF7Q8N684 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CPSF7Q8N684 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
CPSF7Q8N684 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC27.9■■■□□ 2.06
CPSF7Q8N684 AC015813.7-201ENST00000623294 581 ntBASIC27.89■■■□□ 2.06
CPSF7Q8N684 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.86■■■□□ 2.05
CPSF7Q8N684 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
CPSF7Q8N684 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
CPSF7Q8N684 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC27.84■■■□□ 2.05
CPSF7Q8N684 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CPSF7Q8N684 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CPSF7Q8N684 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
CPSF7Q8N684 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC27.79■■■□□ 2.04
CPSF7Q8N684 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CPSF7Q8N684 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC27.78■■■□□ 2.04
CPSF7Q8N684 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CPSF7Q8N684 AC006077.2-201ENST00000623591 457 ntBASIC27.76■■■□□ 2.03
CPSF7Q8N684 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
CPSF7Q8N684 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC27.75■■■□□ 2.03
CPSF7Q8N684 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CPSF7Q8N684 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC27.73■■■□□ 2.03
CPSF7Q8N684 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
CPSF7Q8N684 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CPSF7Q8N684 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
CPSF7Q8N684 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
CPSF7Q8N684 ZNRF2P1-201ENST00000441407 443 ntBASIC27.7■■■□□ 2.02
CPSF7Q8N684 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
CPSF7Q8N684 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
CPSF7Q8N684 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC27.64■■■□□ 2.02
CPSF7Q8N684 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CPSF7Q8N684 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CPSF7Q8N684 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CPSF7Q8N684 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC27.61■■■□□ 2.01
CPSF7Q8N684 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
CPSF7Q8N684 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CPSF7Q8N684 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.58■■■□□ 2
CPSF7Q8N684 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC27.56■■■□□ 2
CPSF7Q8N684 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC27.55■■■□□ 2
CPSF7Q8N684 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC27.54■■■□□ 2
CPSF7Q8N684 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC27.53■■■□□ 2
CPSF7Q8N684 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
CPSF7Q8N684 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CPSF7Q8N684 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
CPSF7Q8N684 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CPSF7Q8N684 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CPSF7Q8N684 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
CPSF7Q8N684 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CPSF7Q8N684 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CPSF7Q8N684 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CPSF7Q8N684 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.44■■□□□ 1.98
CPSF7Q8N684 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
CPSF7Q8N684 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CPSF7Q8N684 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.43■■□□□ 1.98
CPSF7Q8N684 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CPSF7Q8N684 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
CPSF7Q8N684 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CPSF7Q8N684 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CPSF7Q8N684 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CPSF7Q8N684 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CPSF7Q8N684 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
CPSF7Q8N684 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CPSF7Q8N684 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC27.39■■□□□ 1.97
CPSF7Q8N684 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
CPSF7Q8N684 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CPSF7Q8N684 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CPSF7Q8N684 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
CPSF7Q8N684 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CPSF7Q8N684 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CPSF7Q8N684 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CPSF7Q8N684 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
CPSF7Q8N684 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
CPSF7Q8N684 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.3■■□□□ 1.96
CPSF7Q8N684 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CPSF7Q8N684 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CPSF7Q8N684 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC27.24■■□□□ 1.95
CPSF7Q8N684 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CPSF7Q8N684 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CPSF7Q8N684 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC27.19■■□□□ 1.94
CPSF7Q8N684 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CPSF7Q8N684 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CPSF7Q8N684 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CPSF7Q8N684 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC27.16■■□□□ 1.94
CPSF7Q8N684 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 8.8 ms