Protein–RNA interactions for Protein: Q6ZUF6

LINC00336, Putative uncharacterized protein encoded by LINC00336, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336Q6ZUF6 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.75■□□□□ 0.75
LINC00336Q6ZUF6 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00336Q6ZUF6 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
LINC00336Q6ZUF6 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.73■□□□□ 0.75
LINC00336Q6ZUF6 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINC00336Q6ZUF6 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LINC00336Q6ZUF6 RARRES2P7-201ENST00000567349 469 ntBASIC19.72■□□□□ 0.75
LINC00336Q6ZUF6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.71■□□□□ 0.75
LINC00336Q6ZUF6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINC00336Q6ZUF6 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.69■□□□□ 0.74
LINC00336Q6ZUF6 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINC00336Q6ZUF6 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LINC00336Q6ZUF6 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.66■□□□□ 0.74
LINC00336Q6ZUF6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINC00336Q6ZUF6 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LINC00336Q6ZUF6 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19.58■□□□□ 0.72
LINC00336Q6ZUF6 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.57■□□□□ 0.72
LINC00336Q6ZUF6 AC097358.2-201ENST00000607541 1159 ntBASIC19.56■□□□□ 0.72
LINC00336Q6ZUF6 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.54■□□□□ 0.72
LINC00336Q6ZUF6 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
LINC00336Q6ZUF6 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC00336Q6ZUF6 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC00336Q6ZUF6 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC00336Q6ZUF6 SETD8P1-201ENST00000623146 1180 ntBASIC19.46■□□□□ 0.71
LINC00336Q6ZUF6 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
LINC00336Q6ZUF6 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.45■□□□□ 0.7
LINC00336Q6ZUF6 RPS2P35-201ENST00000443417 897 ntBASIC19.43■□□□□ 0.7
LINC00336Q6ZUF6 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.43■□□□□ 0.7
LINC00336Q6ZUF6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00336Q6ZUF6 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
LINC00336Q6ZUF6 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00336Q6ZUF6 AC136428.2-201ENST00000563187 214 ntBASIC19.4■□□□□ 0.7
LINC00336Q6ZUF6 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC00336Q6ZUF6 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.38■□□□□ 0.69
LINC00336Q6ZUF6 SUZ12P1-203ENST00000578195 985 ntBASIC19.37■□□□□ 0.69
LINC00336Q6ZUF6 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC19.36■□□□□ 0.69
LINC00336Q6ZUF6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LINC00336Q6ZUF6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LINC00336Q6ZUF6 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.32■□□□□ 0.68
LINC00336Q6ZUF6 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.3■□□□□ 0.68
LINC00336Q6ZUF6 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC00336Q6ZUF6 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.29■□□□□ 0.68
LINC00336Q6ZUF6 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
LINC00336Q6ZUF6 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.29■□□□□ 0.68
LINC00336Q6ZUF6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINC00336Q6ZUF6 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC19.26■□□□□ 0.67
LINC00336Q6ZUF6 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
LINC00336Q6ZUF6 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LINC00336Q6ZUF6 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.25■□□□□ 0.67
LINC00336Q6ZUF6 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC00336Q6ZUF6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC00336Q6ZUF6 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC19.23■□□□□ 0.67
LINC00336Q6ZUF6 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LINC00336Q6ZUF6 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LINC00336Q6ZUF6 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
LINC00336Q6ZUF6 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LINC00336Q6ZUF6 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.21■□□□□ 0.67
LINC00336Q6ZUF6 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
LINC00336Q6ZUF6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LINC00336Q6ZUF6 AP006261.1-201ENST00000584783 668 ntBASIC19.19■□□□□ 0.66
LINC00336Q6ZUF6 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19.18■□□□□ 0.66
LINC00336Q6ZUF6 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC00336Q6ZUF6 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC00336Q6ZUF6 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC19.17■□□□□ 0.66
LINC00336Q6ZUF6 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.15■□□□□ 0.66
LINC00336Q6ZUF6 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LINC00336Q6ZUF6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC19.1■□□□□ 0.65
LINC00336Q6ZUF6 AL162393.1-201ENST00000437852 946 ntBASIC19.09■□□□□ 0.65
LINC00336Q6ZUF6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LINC00336Q6ZUF6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
LINC00336Q6ZUF6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.08■□□□□ 0.64
LINC00336Q6ZUF6 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC00336Q6ZUF6 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
LINC00336Q6ZUF6 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINC00336Q6ZUF6 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LINC00336Q6ZUF6 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
LINC00336Q6ZUF6 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC18.99■□□□□ 0.63
LINC00336Q6ZUF6 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINC00336Q6ZUF6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LINC00336Q6ZUF6 CAHM-201ENST00000604200 896 ntBASIC18.99■□□□□ 0.63
LINC00336Q6ZUF6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINC00336Q6ZUF6 MVK-208ENST00000539696 608 ntTSL 5 BASIC18.98■□□□□ 0.63
LINC00336Q6ZUF6 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.97■□□□□ 0.63
LINC00336Q6ZUF6 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.97■□□□□ 0.63
LINC00336Q6ZUF6 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC00336Q6ZUF6 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC18.96■□□□□ 0.63
LINC00336Q6ZUF6 MIR7108-201ENST00000614319 87 ntBASIC18.96■□□□□ 0.63
LINC00336Q6ZUF6 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC18.95■□□□□ 0.62
LINC00336Q6ZUF6 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.95■□□□□ 0.62
LINC00336Q6ZUF6 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC00336Q6ZUF6 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC00336Q6ZUF6 AL391121.1-201ENST00000607967 1349 ntBASIC18.95■□□□□ 0.62
LINC00336Q6ZUF6 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC00336Q6ZUF6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.93■□□□□ 0.62
LINC00336Q6ZUF6 MIR3665-201ENST00000578708 105 ntBASIC18.93■□□□□ 0.62
LINC00336Q6ZUF6 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
LINC00336Q6ZUF6 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LINC00336Q6ZUF6 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC00336Q6ZUF6 ABHD17AP4-201ENST00000411545 909 ntBASIC18.92■□□□□ 0.62
LINC00336Q6ZUF6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms